| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g01760.1 |
| Family | GT47 |
| Protein Properties | Length: 430 Molecular Weight: 48595.4 Isoelectric Point: 9.4607 |
| Chromosome | Chromosome/Scaffold: 3 Start: 479167 End: 482008 |
| Description | FRA8 homolog |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 75 | 371 | 0 |
| ALRIYVYDLPARFNRHWVAADARCATHLFAAEVALHEALLAYAGRAARPDDATLFFVPVYVSCNFSTDNGFPSLSHARALLADAVDLVRAQMPYWNRSAG ADHVFVASHDFGACFHPMEDVAIADGIPEFLKRSILLQTFGVQGTHVCQEADHVVIPPHVPPEVALELPEPEKAQRDIFAFFRGKMEVHPKNISGRFYSK KVRTELLQKYGRNRKFYLKRKRYGNYRSEMARSLFCLCPLGWAPWSPRLVESVLLGCIPVIIADDIRLPFPSVLQWLDISLQVAEKDVASLEMVLDH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 430 Download |
| MAMAMRGDPK QRRASASAPH GGAAHHVADK LRRHSTFLLL LLLLWFALSL YLFLSATPPP 60 PRPAFLPSTS TPRPALRIYV YDLPARFNRH WVAADARCAT HLFAAEVALH EALLAYAGRA 120 ARPDDATLFF VPVYVSCNFS TDNGFPSLSH ARALLADAVD LVRAQMPYWN RSAGADHVFV 180 ASHDFGACFH PMEDVAIADG IPEFLKRSIL LQTFGVQGTH VCQEADHVVI PPHVPPEVAL 240 ELPEPEKAQR DIFAFFRGKM EVHPKNISGR FYSKKVRTEL LQKYGRNRKF YLKRKRYGNY 300 RSEMARSLFC LCPLGWAPWS PRLVESVLLG CIPVIIADDI RLPFPSVLQW LDISLQVAEK 360 DVASLEMVLD HVVATNLTVI QKNLWDPVKR KALVFNRPME EGDATWQVLR ELEILLDRSQ 420 RRHVESWKR* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-52 | 72 | 369 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005794 | Golgi apparatus |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN62780.1 | 0 | 3 | 429 | 1 | 449 | Unknown protein [Oryza sativa Japonica Group] |
| GenBank | ACN31903.1 | 0 | 7 | 428 | 2 | 427 | unknown [Zea mays] |
| RefSeq | NP_001048697.1 | 0 | 3 | 429 | 1 | 427 | Os03g0107900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_197685.2 | 0 | 43 | 422 | 50 | 458 | F8H (FRA8 HOMOLOG); catalytic [Arabidopsis thaliana] |
| RefSeq | XP_002468679.1 | 0 | 8 | 429 | 3 | 429 | hypothetical protein SORBIDRAFT_01g050110 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
