| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g04770.1 |
| Family | GH14 |
| Protein Properties | Length: 558 Molecular Weight: 60757.5 Isoelectric Point: 5.6132 |
| Chromosome | Chromosome/Scaffold: 3 Start: 2272965 End: 2276401 |
| Description | beta-amylase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 96 | 513 | 0 |
| YVMMPLDTVRKDGNGLNRRKAVEASLKALKSAGAEGIMVDVWWGIAECEGPGRYNFTGYMELMEMAKKNGLKVQAVMSFHQCGGNVGDSVTIPLPKWVLE EMDKDQDLAYTDRSGRRNYEYLSLGADAMPVLKGRTPVQCYGDFMRAFRDHFAAFMGNTIVEIQVGMGPAGELRYPSYPESNGTWRFPGIGEFQCYDRYM LSSLKAAAEAVGKPEWGNAGPGDSGGYNDWPEDSPFFRREGGWNTPYGEFFMSWYSQMLLEHGERILSAASGVYTGTPGVKISVKVAGIHWHYGTRSHAA ELTAGYYNTRHHDGYQPIARMLARHGAVLNFTCVEMRNHEQPQDAQCRPEELVQQVAAAARESGVGLAGENALPRYDETAHDQIVTTAAEKAEEERMVAF TYLRMGPDLFQPDNWRRF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 558 Download |
| MMSLNLAHQT GAAAAVAPAA PRTAVVAAAA GTVSAPAVAP AAAPSLQLQT QTVDPAAPAQ 60 GPDLPMAFQA LVESLPEEQH PDVGGEERRK VGVPVYVMMP LDTVRKDGNG LNRRKAVEAS 120 LKALKSAGAE GIMVDVWWGI AECEGPGRYN FTGYMELMEM AKKNGLKVQA VMSFHQCGGN 180 VGDSVTIPLP KWVLEEMDKD QDLAYTDRSG RRNYEYLSLG ADAMPVLKGR TPVQCYGDFM 240 RAFRDHFAAF MGNTIVEIQV GMGPAGELRY PSYPESNGTW RFPGIGEFQC YDRYMLSSLK 300 AAAEAVGKPE WGNAGPGDSG GYNDWPEDSP FFRREGGWNT PYGEFFMSWY SQMLLEHGER 360 ILSAASGVYT GTPGVKISVK VAGIHWHYGT RSHAAELTAG YYNTRHHDGY QPIARMLARH 420 GAVLNFTCVE MRNHEQPQDA QCRPEELVQQ VAAAARESGV GLAGENALPR YDETAHDQIV 480 TTAAEKAEEE RMVAFTYLRM GPDLFQPDNW RRFAAFVKRM TESGVRDVCR EQVEREAQGV 540 AHATGSLVHE AAVALSN* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 5.0e-139 | 93 | 527 | 441 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 5.0e-143 | 96 | 516 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN00197 | PLN00197 | 0 | 47 | 555 | 525 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 0 | 77 | 526 | 450 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 93 | 520 | 435 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0005634 | nucleus |
| GO:0005829 | cytosol |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006950 | response to stress |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29617.1 | 0 | 2 | 557 | 1 | 572 | beta-amylase [Zea mays] |
| GenBank | EAY88485.1 | 0 | 2 | 557 | 1 | 556 | hypothetical protein OsI_09956 [Oryza sativa Indica Group] |
| RefSeq | NP_001048926.1 | 0 | 1 | 557 | 1 | 557 | Os03g0141200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001148159.1 | 0 | 1 | 557 | 1 | 573 | beta-amylase [Zea mays] |
| RefSeq | XP_002468533.1 | 0 | 1 | 557 | 1 | 564 | hypothetical protein SORBIDRAFT_01g047500 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 93 | 529 | 12 | 448 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1q6c_A | 0 | 93 | 529 | 12 | 448 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 93 | 529 | 12 | 448 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1ukp_D | 0 | 93 | 529 | 12 | 448 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 93 | 529 | 12 | 448 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO779314 | 408 | 153 | 555 | 0 |
| HO826564 | 406 | 150 | 551 | 0 |
| BU103692 | 435 | 92 | 526 | 0 |
| HO624546 | 442 | 115 | 552 | 0 |
| HO593646 | 442 | 115 | 552 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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