| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g07820.1 |
| Family | GT47 |
| Protein Properties | Length: 577 Molecular Weight: 66478.6 Isoelectric Point: 7.7913 |
| Chromosome | Chromosome/Scaffold: 3 Start: 3978668 End: 3983549 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 212 | 564 | 0 |
| KKRPLIYVYDLPAEFDSHLLEGRHYKFQCVNRIYDDKNRTIWTQQLYGAQIALYESILASPHRTLNGDEADYFYVPALDSCLITRSDDAPHLQMPRDLRL RSYHTLEYYRMTYDHIAQRYPYWNRTSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNTKHKNSTTAYWADNWNYIPIDRRGNHPCFDPRKDLVLPA WKQPNPAAIWLKLWARTRNNRTTLFYFNGNLGPAYKDGRHEDTYSMGIRQKLAAEFGSTPDKQGKLGRQHTANVTVTYLRTEKYYEELASSIFCGVLPGD GWSGRMEDSMLQGCIPVIIQDGILLPYENMLNYNSFAVRIQEDDIPNLIRILR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MQMLSWICWL SYTGKRCEEV QKVECNLPSS QEWPVGRWIV SICPAHCDTT RAMCFCGPGT 60 KYPDRPVAEA CGFKTILPKK PDDSKLTDWK TPDPDVFTTN KSKPGWCNVN PEDAYSSKVK 120 FKEECDCKYD GLWGRFCETR VECSCINQCS GHGHCRGGFC QCDGGYFGID CSMPSNYSVA 180 YGMPSWLQPP MNLPDLKNIS SSSINVKVVA KKKRPLIYVY DLPAEFDSHL LEGRHYKFQC 240 VNRIYDDKNR TIWTQQLYGA QIALYESILA SPHRTLNGDE ADYFYVPALD SCLITRSDDA 300 PHLQMPRDLR LRSYHTLEYY RMTYDHIAQR YPYWNRTSGR DHIWFFSWDE GACYAPKEIW 360 NSMMLVHWGN TNTKHKNSTT AYWADNWNYI PIDRRGNHPC FDPRKDLVLP AWKQPNPAAI 420 WLKLWARTRN NRTTLFYFNG NLGPAYKDGR HEDTYSMGIR QKLAAEFGST PDKQGKLGRQ 480 HTANVTVTYL RTEKYYEELA SSIFCGVLPG DGWSGRMEDS MLQGCIPVII QDGILLPYEN 540 MLNYNSFAVR IQEDDIPNLI RILRVCVCIN SPFVRL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00054 | EGF_CA | 0.008 | 142 | 171 | 34 | + Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. | ||
| pfam07974 | EGF_2 | 0.0003 | 143 | 171 | 31 | + EGF-like domain. This family contains EGF domains found in a variety of extracellular proteins. | ||
| pfam03016 | Exostosin | 2.0e-74 | 214 | 564 | 354 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005623 | cell |
| GO:0008152 | metabolic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29877.1 | 0 | 8 | 564 | 169 | 727 | unnamed protein product [Vitis vinifera] |
| GenBank | EAZ25771.1 | 0 | 8 | 564 | 129 | 685 | hypothetical protein OsJ_09611 [Oryza sativa Japonica Group] |
| GenBank | EEC74609.1 | 0 | 14 | 564 | 118 | 643 | hypothetical protein OsI_10218 [Oryza sativa Indica Group] |
| RefSeq | NP_001049126.1 | 0 | 1 | 576 | 1 | 576 | Os03g0174300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002277596.1 | 0 | 8 | 564 | 141 | 699 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO884759 | 314 | 214 | 523 | 0 |
| FF580916 | 249 | 315 | 563 | 0 |
| JG935785 | 250 | 277 | 526 | 0 |
| HO651219 | 355 | 214 | 566 | 0 |
| EH756685 | 261 | 267 | 527 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
