| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g10469.1 |
| Family | GH10 |
| Protein Properties | Length: 583 Molecular Weight: 65547.2 Isoelectric Point: 6.7219 |
| Chromosome | Chromosome/Scaffold: 3 Start: 5326711 End: 5330595 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 212 | 472 | 0 |
| KGFPLGNAMTKEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDYKVSDKMVELAEKHNITLRGHNVFWDDQDKQMDWVEKLGVPELKEAMAKRL KDIVTRYAGKVIHWDVVNENLHFNFFEGKLGKDASAEIFRDVAKLDSKPILFMNEFNTIEEPNDAAPLPTKYVAKLKQIREFPGNADLKYGIGLESHFAA PNIPYMRGSIDTLAQAKVPIWLTEVDVKPCKNQVEYLDEVMREGFAHPAVKGIVLWGAWHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 583 Download |
| MKVFTGKLVF FLAIILFEGC LVRSQSVPYD YSANIECVKE PEKPLYGGGI LKETEAKGYA 60 SGKKLLSENS KSAAPVKGSA LKVDLKKDHH YALSVWLQLS KGEGDIRAVL VTPDGKFNTA 120 GMIAAKCGCW TMLKGGATSY DDGKGDIFFE TNVTAEVMAE GMALQPFSFD EWKGHRAESV 180 KKERMKKVKI TVVGPDGKPV PEADVSLERV GKGFPLGNAM TKEILDMPEY EKWFAARFRY 240 ATLENEMKWY STEFHQNEED YKVSDKMVEL AEKHNITLRG HNVFWDDQDK QMDWVEKLGV 300 PELKEAMAKR LKDIVTRYAG KVIHWDVVNE NLHFNFFEGK LGKDASAEIF RDVAKLDSKP 360 ILFMNEFNTI EEPNDAAPLP TKYVAKLKQI REFPGNADLK YGIGLESHFA APNIPYMRGS 420 IDTLAQAKVP IWLTEVDVKP CKNQVEYLDE VMREGFAHPA VKGIVLWGAW HAKGCYVMCF 480 TDNSFKNLPV GDAIDKLLKE WTAGHTGKTD SKGVLEVEIF HGEYNATVKH KEFKENCMTL 540 DLDSKAEAKI ELRSDKVLTP WVELKYPNRH LGLHRSQESG CS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 6.0e-29 | 217 | 468 | 276 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 9.0e-40 | 214 | 468 | 278 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 4.0e-67 | 247 | 494 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94508.1 | 0 | 1 | 554 | 1 | 554 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABF94509.1 | 0 | 36 | 582 | 9 | 555 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC74704.1 | 0 | 1 | 554 | 1 | 554 | hypothetical protein OsI_10420 [Oryza sativa Indica Group] |
| GenBank | EEE58525.1 | 0 | 24 | 445 | 562 | 987 | hypothetical protein OsJ_09814 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049300.1 | 0 | 1 | 582 | 1 | 582 | Os03g0201800 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 1e-23 | 216 | 494 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1tux_A | 8e-21 | 236 | 498 | 38 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1xyz_B | 2e-20 | 193 | 468 | 13 | 306 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 2e-20 | 193 | 468 | 13 | 306 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1ta3_B | 4e-20 | 211 | 468 | 13 | 269 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
