| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g12140.1 |
| Family | CBM43 |
| Protein Properties | Length: 505 Molecular Weight: 53807.1 Isoelectric Point: 5.4889 |
| Chromosome | Chromosome/Scaffold: 3 Start: 6369445 End: 6373705 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 446 | 5.5e-31 |
| CVAREGADEKMLQAALDWACGPGKVDCSALMQGQPCYDPDNVEAHATYAFNAYYHGMGMGSGTCYFSGVAVITTTDPSHGSC | |||
| GH17 | 26 | 346 | 0 |
| IGVNIGTAMTSVPAPTQITTLLRSQNIRHVRLYDADPAMLAALANTGIRVIVSVPNEQLLAIGNSNATAANWVARNVAAHYPSVNITAIAVGSEVLSTLP NAAPLLMPAIRYLQNALVAAALDRYIKISTPHSSSIILDSFPPSQAFFNRSLDPVLVPLLKFLQSTGSPLMLNVYPYYDYMRSNGVIPLDYALFRPLPPN KEAVDANTLLHYTNVFDAVVDAAYFAMAYLNVTNVPVMVTETGWPHKGDPSNEPDATSDNADTYNSNLIRHVMNTTGTPKHPGVAVPTYIYELYDEDTRP GSTSEKYWGLFDMNGIPAYTL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 505 Download |
| MKKLFFFLFL LILAASVVHG EDGAYIGVNI GTAMTSVPAP TQITTLLRSQ NIRHVRLYDA 60 DPAMLAALAN TGIRVIVSVP NEQLLAIGNS NATAANWVAR NVAAHYPSVN ITAIAVGSEV 120 LSTLPNAAPL LMPAIRYLQN ALVAAALDRY IKISTPHSSS IILDSFPPSQ AFFNRSLDPV 180 LVPLLKFLQS TGSPLMLNVY PYYDYMRSNG VIPLDYALFR PLPPNKEAVD ANTLLHYTNV 240 FDAVVDAAYF AMAYLNVTNV PVMVTETGWP HKGDPSNEPD ATSDNADTYN SNLIRHVMNT 300 TGTPKHPGVA VPTYIYELYD EDTRPGSTSE KYWGLFDMNG IPAYTLHLTG SGVLLANDTT 360 NQTYCVAREG ADEKMLQAAL DWACGPGKVD CSALMQGQPC YDPDNVEAHA TYAFNAYYHG 420 MGMGSGTCYF SGVAVITTTD PSHGSCVYAG SGGKNGTSLL NGTSLAPSSN STAGDSGAHR 480 AIGDVSSFVR AVVAALLLSV VLLL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-7 | 258 | 336 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-19 | 363 | 435 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-40 | 363 | 448 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-81 | 26 | 346 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN30650.1 | 0 | 1 | 492 | 1 | 489 | unknown [Zea mays] |
| RefSeq | NP_001049413.1 | 0 | 1 | 504 | 1 | 504 | Os03g0221500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130376.1 | 0 | 1 | 495 | 1 | 492 | hypothetical protein LOC100191471 [Zea mays] |
| RefSeq | NP_001150141.1 | 0 | 1 | 492 | 1 | 489 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
| RefSeq | XP_002468258.1 | 0 | 1 | 495 | 1 | 492 | hypothetical protein SORBIDRAFT_01g042560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 26 | 349 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 26 | 349 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 26 | 349 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 26 | 349 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
