| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g12140.3 |
| Family | CBM43 |
| Protein Properties | Length: 472 Molecular Weight: 50268.9 Isoelectric Point: 5.2906 |
| Chromosome | Chromosome/Scaffold: 3 Start: 6371551 End: 6373705 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 332 | 413 | 4.9e-31 |
| CVAREGADEKMLQAALDWACGPGKVDCSALMQGQPCYDPDNVEAHATYAFNAYYHGMGMGSGTCYFSGVAVITTTDPSHGSC | |||
| GH17 | 4 | 313 | 0 |
| VPAPTQITTLLRSQNIRHVRLYDADPAMLAALANTGIRVIVSVPNEQLLAIGNSNATAANWVARNVAAHYPSVNITAIAVGSEVLSTLPNAAPLLMPAIR YLQNALVAAALDRYIKISTPHSSSIILDSFPPSQAFFNRSLDPVLVPLLKFLQSTGSPLMLNVYPYYDYMRSNGVIPLDYALFRPLPPNKEAVDANTLLH YTNVFDAVVDAAYFAMAYLNVTNVPVMVTETGWPHKGDPSNEPDATSDNADTYNSNLIRHVMNTTGTPKHPGVAVPTYIYELYDEDTRPGSTSEKYWGLF DMNGIPAYTL | |||
| Full Sequence |
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| Protein Sequence Length: 472 Download |
| MTSVPAPTQI TTLLRSQNIR HVRLYDADPA MLAALANTGI RVIVSVPNEQ LLAIGNSNAT 60 AANWVARNVA AHYPSVNITA IAVGSEVLST LPNAAPLLMP AIRYLQNALV AAALDRYIKI 120 STPHSSSIIL DSFPPSQAFF NRSLDPVLVP LLKFLQSTGS PLMLNVYPYY DYMRSNGVIP 180 LDYALFRPLP PNKEAVDANT LLHYTNVFDA VVDAAYFAMA YLNVTNVPVM VTETGWPHKG 240 DPSNEPDATS DNADTYNSNL IRHVMNTTGT PKHPGVAVPT YIYELYDEDT RPGSTSEKYW 300 GLFDMNGIPA YTLHLTGSGV LLANDTTNQT YCVAREGADE KMLQAALDWA CGPGKVDCSA 360 LMQGQPCYDP DNVEAHATYA FNAYYHGMGM GSGTCYFSGV AVITTTDPSH GSCVYAGSGG 420 KNGTSLLNGT SLAPSSNSTA GDSGAHRAIG DVSSFVRAVV AALLLSVVLL L* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-7 | 225 | 303 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-19 | 330 | 402 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-40 | 330 | 415 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-79 | 5 | 313 | 309 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF80565.1 | 0 | 1 | 462 | 1 | 459 | unknown [Zea mays] |
| GenBank | ACN30650.1 | 0 | 1 | 459 | 34 | 489 | unknown [Zea mays] |
| RefSeq | NP_001049413.1 | 0 | 1 | 471 | 34 | 504 | Os03g0221500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130376.1 | 0 | 1 | 462 | 34 | 492 | hypothetical protein LOC100191471 [Zea mays] |
| RefSeq | XP_002468258.1 | 0 | 1 | 462 | 34 | 492 | hypothetical protein SORBIDRAFT_01g042560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 3 | 315 | 11 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 2 | 316 | 12 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 2 | 316 | 12 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 2 | 316 | 12 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 2 | 316 | 12 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CO453799 | 272 | 158 | 429 | 0 |
| DV023702 | 270 | 24 | 293 | 0 |
| GE476981 | 315 | 64 | 378 | 0 |
| DR951683 | 295 | 36 | 330 | 0 |
| EE022197 | 244 | 79 | 322 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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