| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g12320.1 |
| Family | CE11 |
| Protein Properties | Length: 322 Molecular Weight: 34174 Isoelectric Point: 7.4553 |
| Chromosome | Chromosome/Scaffold: 3 Start: 6493908 End: 6498974 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE11 | 26 | 307 | 0 |
| QQTLAAAVSRSGVGLHSGAKTTATLLPARAGEGRYFVVEGEETRVAAEVANAEAHSPLCTALRRGGARVRTVEHLLSAMEALGVDNCRVEVSGGDEIPLL DGSAQEWVMAIRGAGQCAAKDSSGQKLEKLAPEIHEPVYLQKSDCFIAALPSSRIRITYGIDFPKVPGIGCQRFATVLDANVYSSKIAPARTFCIFEEVE KLRSAGLIRGGSLENATVCSISGGWLNPPLRFEDEPCRHKILDLIGDFSLLAQNGNQGFPLAHVVAYKAGHALHTDFLRHLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 322 Download |
| MCGSAARALN SVSRAAFSWK PTGLPQQTLA AAVSRSGVGL HSGAKTTATL LPARAGEGRY 60 FVVEGEETRV AAEVANAEAH SPLCTALRRG GARVRTVEHL LSAMEALGVD NCRVEVSGGD 120 EIPLLDGSAQ EWVMAIRGAG QCAAKDSSGQ KLEKLAPEIH EPVYLQKSDC FIAALPSSRI 180 RITYGIDFPK VPGIGCQRFA TVLDANVYSS KIAPARTFCI FEEVEKLRSA GLIRGGSLEN 240 ATVCSISGGW LNPPLRFEDE PCRHKILDLI GDFSLLAQNG NQGFPLAHVV AYKAGHALHT 300 DFLRHLLGRS AVGQENLAEQ C* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 1.0e-66 | 26 | 306 | 316 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 8.0e-81 | 26 | 307 | 285 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam03331 | LpxC | 2.0e-93 | 26 | 307 | 285 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| COG0774 | LpxC | 2.0e-93 | 26 | 307 | 293 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| PRK13186 | lpxC | 2.0e-111 | 26 | 307 | 286 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006629 | lipid metabolic process |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009058 | biosynthetic process |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN52736.1 | 0 | 1 | 321 | 1 | 315 | Hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | ABF94722.1 | 0 | 1 | 280 | 1 | 280 | UDP-3-0-acyl N-acetylglucosamine deacetylase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEE58623.1 | 0 | 1 | 321 | 1 | 322 | hypothetical protein OsJ_09977 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049426.1 | 0 | 1 | 321 | 1 | 321 | Os03g0223900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002468246.1 | 0 | 1 | 321 | 1 | 325 | hypothetical protein SORBIDRAFT_01g042410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4j3d_B | 3e-40 | 24 | 307 | 2 | 275 | A Chain A, Pseudomonas Aeruginosa Lpxc In Complex With A Hydroxamate Inhibitor |
| PDB | 4j3d_A | 3e-40 | 24 | 307 | 2 | 275 | A Chain A, Pseudomonas Aeruginosa Lpxc In Complex With A Hydroxamate Inhibitor |
| PDB | 3uhm_A | 3e-40 | 24 | 307 | 2 | 275 | A Chain A, Pseudomonas Aeruginosa Lpxc In Complex With A Hydroxamate Inhibitor |
| PDB | 3u1y_B | 3e-40 | 24 | 307 | 2 | 275 | A Chain A, Pseudomonas Aeruginosa Lpxc In Complex With A Hydroxamate Inhibitor |
| PDB | 3u1y_A | 3e-40 | 24 | 307 | 2 | 275 | A Chain A, Pseudomonas Aeruginosa Lpxc In Complex With A Hydroxamate Inhibitor |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | UDPACYLGLCNACDEACETYL-RXN | EC-3.5.1.108 | UDP-3-O-acyl-N-acetylglucosamine deacetylase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| CT850072 | 295 | 1 | 295 | 0 |
| HX136805 | 258 | 7 | 262 | 0 |
| CK207177 | 248 | 7 | 252 | 0 |
| CA246559 | 204 | 118 | 321 | 0 |
| CA238382 | 186 | 118 | 303 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |