| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g14010.2 |
| Family | GH10 |
| Protein Properties | Length: 559 Molecular Weight: 62555.8 Isoelectric Point: 6.2425 |
| Chromosome | Chromosome/Scaffold: 3 Start: 7599694 End: 7603064 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH10 | 212 | 472 | 0 |
| QTAKDFPFGSAIASTILGNQAYQKWFVDRFNAAVFEDELKWYSTEPMSGQLRFDVPDQMLAFVRSHRVMVRGHNIFWENQDATPSWVKGLSPDDLRAAVN GRIQNLMTRYRGEFAHWDVNNEMLHYNFYEQRLGANASVEFFSVAQDADPLATLFMNEFNVIETCDDVSSTVDTYVAKLKDLRAGGAVLEGIGLEGHFLK PNIPLMRAVLDKLATLGLPIWFTEIDISNRYDAQTQAVYLEQVLREAYSHPAVTGVMLWTA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 559 Download |
| MRRFSLHAVR YLVLWMLLRC GRELVAAVPP DGWYDYTAYT DCRGQPEPAL YNGGILRFGN 60 SDDPTGYRTT ETGVFSPAFV VYNLNKTTMY TFSSWVKLEG ASSALITARL ALDNAGARCI 120 GTVLARNDCW AFLKGGFVLD WPTQTSVIFF QNADKTPMKI TVASGSLQPF TSDQWSMHQK 180 DTIRKRRKRM ATIHVADQQG GRVVGASVSV RQTAKDFPFG SAIASTILGN QAYQKWFVDR 240 FNAAVFEDEL KWYSTEPMSG QLRFDVPDQM LAFVRSHRVM VRGHNIFWEN QDATPSWVKG 300 LSPDDLRAAV NGRIQNLMTR YRGEFAHWDV NNEMLHYNFY EQRLGANASV EFFSVAQDAD 360 PLATLFMNEF NVIETCDDVS STVDTYVAKL KDLRAGGAVL EGIGLEGHFL KPNIPLMRAV 420 LDKLATLGLP IWFTEIDISN RYDAQTQAVY LEQVLREAYS HPAVTGVMLW TALHPNGCYQ 480 MCLTDWNLNN LPVGDVVDRL LQEWQTGQAA GPTDAHGAYS FSGFLGEYIV SVTYANSTSQ 540 ATFSLSPGDE TRHINIQI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 7.0e-37 | 214 | 470 | 279 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-59 | 214 | 470 | 273 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-75 | 250 | 497 | 269 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF94920.1 | 0 | 1 | 558 | 1 | 563 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABF94921.1 | 0 | 1 | 558 | 1 | 558 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC74851.1 | 0 | 1 | 558 | 160 | 717 | hypothetical protein OsI_10717 [Oryza sativa Indica Group] |
| RefSeq | NP_001140909.1 | 0 | 1 | 558 | 3 | 560 | hypothetical protein LOC100272986 [Zea mays] |
| RefSeq | XP_002468186.1 | 0 | 1 | 558 | 3 | 560 | hypothetical protein SORBIDRAFT_01g041310 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 4e-30 | 219 | 470 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1v6y_A | 6e-28 | 219 | 470 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 3msg_B | 5e-27 | 214 | 439 | 13 | 245 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 3msg_A | 5e-27 | 214 | 439 | 13 | 245 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 3msd_B | 5e-27 | 214 | 439 | 13 | 245 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
