| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g15320.1 |
| Family | AA5 |
| Protein Properties | Length: 565 Molecular Weight: 60723.8 Isoelectric Point: 6.0909 |
| Chromosome | Chromosome/Scaffold: 3 Start: 8384206 End: 8386091 |
| Description | glyoxal oxidase-related protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA5 | 27 | 563 | 0 |
| PASGAGGRWDVLQRSIGVSAMHMQLLHNDRVIIFDRTDFGLSNLSLPDGRCRRNPRERVVPMDCTAHSAEYDVASNTFRPLFVFTDTWCSSGTVAPDGTL VQTGGWNDGYRNVRTMAACEAGDDTCDWDETQDALAANRWYATNQILPDGRAFIVGGRRQFTYEFYPTADSSGGSAISLPFLVQTKDPEENNLYPFVHLN IDGNLFIFAKNRAILFDYKKNKVVRTYPELAGGDPRNYPSSGSSVLLPLKPSPTEAEVLVCGGAPAGSYTSTKDGTFSSALVTCGRIKITDTAPAWVIET MPSPRVMGDMILLPNGAEVVIINGAMDGTAGWESAKTPAYAPVIYRPDHSPGDRFEEQSSTDIARLYHSSAVLLRDGRLLVGGSNPHIYYNFSNVQYPTE LSLEAYSPEYLDPSNDALRPTIVDPSPNGAAVSVTYGASLTLQFAVPAARRARGGGGGGGIGLVSVTMVAPSFTTHSFAMNQRLLLLDAVKTAALARAST YQTSVVMPATAALAPPGYYMVFVVNGHIPSEGIWVHI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MKLTLLGNCI HHPVLLLVIL ACAGIAPASG AGGRWDVLQR SIGVSAMHMQ LLHNDRVIIF 60 DRTDFGLSNL SLPDGRCRRN PRERVVPMDC TAHSAEYDVA SNTFRPLFVF TDTWCSSGTV 120 APDGTLVQTG GWNDGYRNVR TMAACEAGDD TCDWDETQDA LAANRWYATN QILPDGRAFI 180 VGGRRQFTYE FYPTADSSGG SAISLPFLVQ TKDPEENNLY PFVHLNIDGN LFIFAKNRAI 240 LFDYKKNKVV RTYPELAGGD PRNYPSSGSS VLLPLKPSPT EAEVLVCGGA PAGSYTSTKD 300 GTFSSALVTC GRIKITDTAP AWVIETMPSP RVMGDMILLP NGAEVVIING AMDGTAGWES 360 AKTPAYAPVI YRPDHSPGDR FEEQSSTDIA RLYHSSAVLL RDGRLLVGGS NPHIYYNFSN 420 VQYPTELSLE AYSPEYLDPS NDALRPTIVD PSPNGAAVSV TYGASLTLQF AVPAARRARG 480 GGGGGGIGLV SVTMVAPSFT THSFAMNQRL LLLDAVKTAA LARASTYQTS VVMPATAALA 540 PPGYYMVFVV NGHIPSEGIW VHIQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09118 | DUF1929 | 5.0e-25 | 445 | 563 | 120 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
| cd02851 | E_set_GO_C | 7.0e-27 | 441 | 563 | 124 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
| pfam07250 | Glyoxal_oxid_N | 3.0e-128 | 47 | 289 | 246 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0005623 | cell |
| GO:0008150 | biological_process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY89314.1 | 0 | 1 | 564 | 1 | 563 | hypothetical protein OsI_10817 [Oryza sativa Indica Group] |
| RefSeq | NP_001049609.1 | 0 | 1 | 564 | 1 | 564 | Os03g0258900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149941.1 | 0 | 24 | 564 | 30 | 577 | glyoxal oxidase [Zea mays] |
| RefSeq | XP_002438138.1 | 0 | 77 | 564 | 65 | 558 | hypothetical protein SORBIDRAFT_10g008655 [Sorghum bicolor] |
| RefSeq | XP_002468154.1 | 0 | 24 | 564 | 36 | 582 | hypothetical protein SORBIDRAFT_01g040550 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wq8_A | 0.000000000001 | 112 | 551 | 247 | 646 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
| PDB | 2eic_A | 0.000000000004 | 112 | 551 | 225 | 624 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 1t2x_A | 0.000000000005 | 112 | 551 | 225 | 624 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
| PDB | 2eib_A | 0.000000000008 | 112 | 551 | 225 | 624 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 2eid_A | 0.00000000001 | 112 | 551 | 225 | 624 | A Chain A, Galactose Oxidase W290g Mutant |
