| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g17850.1 |
| Family | GT43 |
| Protein Properties | Length: 416 Molecular Weight: 44393.2 Isoelectric Point: 8.7937 |
| Chromosome | Chromosome/Scaffold: 3 Start: 9946381 End: 9952426 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 121 | 338 | 0 |
| MAHTLRLVPPPLLWVVVEANPDVAATARLLRTTGLMYRHLTYKDNFTVADAAAGKERHHQRNVALGHIEHHRLAGVVLFAGLGDTFDLRFFDQLRQIRTF GAWPVATMSQNERKVVVQGPACSSSSVAGWFSMDLSNATSPVAVGGAGYGAAAARPRELDVHGFAFNSSVLWDPERWGRYPTSEPDKSQDSVKFVQQVVL EDYSKVRGIPSDCSEVMA | |||
| Full Sequence |
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| Protein Sequence Length: 416 Download |
| MGSSTDHGGA GGRGKKGSGS QLWKKALLHS SLCFVMGFFT GFAPSSVSDW TSAAVSAGGV 60 GSSHVVRSLH ATGGAAVNRS LLAQAAAGAV DAGPQPLLVV VTTTESTPSA AGQRAAALTR 120 MAHTLRLVPP PLLWVVVEAN PDVAATARLL RTTGLMYRHL TYKDNFTVAD AAAGKERHHQ 180 RNVALGHIEH HRLAGVVLFA GLGDTFDLRF FDQLRQIRTF GAWPVATMSQ NERKVVVQGP 240 ACSSSSVAGW FSMDLSNATS PVAVGGAGYG AAAARPRELD VHGFAFNSSV LWDPERWGRY 300 PTSEPDKSQD SVKFVQQVVL EDYSKVRGIP SDCSEVMAKL RTVSQQLEAT WRSALAIINE 360 LLRACASVHG HVRSKLDSLY RSDFPQTEPE TLICLIHDHA SHYIYGGRFL SGDFC* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 5.0e-32 | 121 | 337 | 231 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 9.0e-53 | 97 | 337 | 244 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| PLN02458 | PLN02458 | 1.0e-86 | 21 | 337 | 343 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005794 | Golgi apparatus |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0009987 | cellular process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95369.1 | 0 | 1 | 415 | 1 | 415 | Glycosyltransferase family 43 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| DDBJ | BAF11694.2 | 0 | 1 | 337 | 1 | 337 | Os03g0287800 [Oryza sativa Japonica Group] |
| EMBL | CAM91965.1 | 0 | 1 | 337 | 1 | 333 | putative xylan synthase [Triticum aestivum] |
| RefSeq | NP_001049780.1 | 0 | 1 | 337 | 1 | 337 | Os03g0287800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002468048.1 | 0 | 1 | 337 | 1 | 343 | hypothetical protein SORBIDRAFT_01g038640 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.00000000001 | 96 | 226 | 3 | 139 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| PDB | 1v84_A | 0.00000000001 | 96 | 226 | 3 | 139 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| PDB | 1v83_B | 0.00000000001 | 96 | 226 | 3 | 139 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| PDB | 1v83_A | 0.00000000001 | 96 | 226 | 3 | 139 | A Chain A, Crystal Structure Of Lpxc From Pseudomonas Aeruginosa Complexed With The Potent Bb-78485 Inhibitor |
| PDB | 1v82_B | 0.00000000001 | 96 | 226 | 3 | 139 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EG377730 | 187 | 151 | 337 | 0 |
| HX129161 | 228 | 1 | 226 | 0 |
| HX163937 | 227 | 1 | 225 | 0 |
| EG377374 | 232 | 1 | 225 | 0 |
| CA210459 | 151 | 187 | 337 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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