| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g20420.1 |
| Family | GH51 |
| Protein Properties | Length: 676 Molecular Weight: 74012.4 Isoelectric Point: 4.6917 |
| Chromosome | Chromosome/Scaffold: 3 Start: 11549506 End: 11558340 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 188 | 537 | 0 |
| TITAEKGDFAGWTKVEFDLQSSERNTSSRLQLTTTKNGIIWFDQVSVMPSDTYMGHGFRKDLATMLANLKPRFLKFPGGNYVMGNYLLNAFRWSETIGPW EERPGHFNDVWNYWTDDGLGFFEFLQLAEDLDACPVWVINDGASLNEQIPSATIAAFVKDVVDGIEFARGDPKTTWGSVRAAMGHPEPFPLYYISVGNQE CSKPYYKEKYVKFYSAIKASYPDIKIISSCDISSISAVNPADLYDVHVYTSSGDMFSKTRMFDSTPRSGPKAFVSEYAVTGNDAGRGTLVAALAEAAFLI GLERNSDVVEMASCAPLFINDNDRGFSPDAIVFNSWQHYGCPNYWMLHFF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 676 Download |
| MGVRRGRLDS SLFHMLVLVC ALSQVLFVGL VTGQTAQLSV DASSQNGRTI PDKMFGIFFE 60 ELNHAGAGGL WAELVSNRGF EAGGINTPSN IDPWLIIGDE SNIIVETDRS SCFASNPIAL 120 RMEVLCGATG TNACPSGGVG IYNPGYWGMN IEKTKVYKVS MYIRSSDSVD LAVSLTSSDG 180 LQNLATHTIT AEKGDFAGWT KVEFDLQSSE RNTSSRLQLT TTKNGIIWFD QVSVMPSDTY 240 MGHGFRKDLA TMLANLKPRF LKFPGGNYVM GNYLLNAFRW SETIGPWEER PGHFNDVWNY 300 WTDDGLGFFE FLQLAEDLDA CPVWVINDGA SLNEQIPSAT IAAFVKDVVD GIEFARGDPK 360 TTWGSVRAAM GHPEPFPLYY ISVGNQECSK PYYKEKYVKF YSAIKASYPD IKIISSCDIS 420 SISAVNPADL YDVHVYTSSG DMFSKTRMFD STPRSGPKAF VSEYAVTGND AGRGTLVAAL 480 AEAAFLIGLE RNSDVVEMAS CAPLFINDND RGFSPDAIVF NSWQHYGCPN YWMLHFFKDS 540 SGATLHPLTI QVSNYDQLAA SALTWQNSND GNTYLKIKVV NFGNKAVNLN IAVAGLENGI 600 QEFGSIKTVL TSGWLRDENS FQQPDKVVPA ASPITNAGEK MGVIVDPYSL TSFDLLLDTN 660 TDKYPLLESS FHSSM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 9.0e-5 | 529 | 649 | 128 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 1.0e-24 | 244 | 386 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 3.0e-37 | 462 | 649 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 2.0e-48 | 462 | 649 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005576 | extracellular region |
| GO:0005618 | cell wall |
| GO:0005773 | vacuole |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95656.1 | 0 | 1 | 675 | 1 | 675 | Alpha-L-arabinofuranosidase C-terminus family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| DDBJ | BAC10349.1 | 0 | 1 | 657 | 1 | 656 | putative arabinoxylan narabinofuranohydrolase isoenzyme AXAH-I [Oryza sativa Japonica Group] |
| GenBank | EEC75141.1 | 0 | 1 | 675 | 1 | 679 | hypothetical protein OsI_11337 [Oryza sativa Indica Group] |
| GenBank | EEE58961.1 | 0 | 1 | 675 | 1 | 679 | hypothetical protein OsJ_10647 [Oryza sativa Japonica Group] |
| RefSeq | XP_002463418.1 | 0 | 1 | 658 | 1 | 659 | hypothetical protein SORBIDRAFT_02g043530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ug5_F | 0.000000000000002 | 243 | 658 | 67 | 504 | A Chain A, Galactose Oxidase W290g Mutant |
| PDB | 3ug5_E | 0.000000000000002 | 243 | 658 | 67 | 504 | A Chain A, Galactose Oxidase W290g Mutant |
| PDB | 3ug5_D | 0.000000000000002 | 243 | 658 | 67 | 504 | A Chain A, Galactose Oxidase W290g Mutant |
| PDB | 3ug5_C | 0.000000000000002 | 243 | 658 | 67 | 504 | A Chain A, Galactose Oxidase W290g Mutant |
| PDB | 3ug5_B | 0.000000000000002 | 243 | 658 | 67 | 504 | A Chain A, Galactose Oxidase W290g Mutant |
