| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g20850.1 |
| Family | GT47 |
| Protein Properties | Length: 469 Molecular Weight: 52311.6 Isoelectric Point: 8.3734 |
| Chromosome | Chromosome/Scaffold: 3 Start: 11805189 End: 11807807 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 68 | 390 | 0 |
| AALRVFMYDLPAEFHFGLLDWEPQGGGGGGGGGVWPDVRGGGVPEYPGGLNLQHSIEYWLTLDLLASEQGAPTPCGAVRVRHAAAADVVFVPFFASLSFN RHSKVVPPARASEDRALQRRLLDYLAARPEWRRSGGRDHVVLAHHPNGMLDARYKLWPCVFVLCDFGRYPPSVAGLDKDVIAPYRHVVPNFANDSAGYDD RPTLLYFQGAIYRKDGGFIRQELYYLLKDEKDVHFSFGSVVGNGIEQATQGMRASKFCLNIAGDTPSSNRLFDSIVSHCVPIIISDEIELPFEDVLDYSK FCIIVRGADAVKKGFLMNLINGI | |||
| Full Sequence |
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| Protein Sequence Length: 469 Download |
| MAAAAASASA SCRRRPIAWF FAIAALLFFF SWYLLLDSAA VTPEPLLAAR GQGLRVGSSG 60 RKCDPATAAL RVFMYDLPAE FHFGLLDWEP QGGGGGGGGG VWPDVRGGGV PEYPGGLNLQ 120 HSIEYWLTLD LLASEQGAPT PCGAVRVRHA AAADVVFVPF FASLSFNRHS KVVPPARASE 180 DRALQRRLLD YLAARPEWRR SGGRDHVVLA HHPNGMLDAR YKLWPCVFVL CDFGRYPPSV 240 AGLDKDVIAP YRHVVPNFAN DSAGYDDRPT LLYFQGAIYR KDGGFIRQEL YYLLKDEKDV 300 HFSFGSVVGN GIEQATQGMR ASKFCLNIAG DTPSSNRLFD SIVSHCVPII ISDEIELPFE 360 DVLDYSKFCI IVRGADAVKK GFLMNLINGI SREDWTRMWN RLKEVERHFE YQYPSQNDDA 420 VQMIWKAIAR KAPSIRLKVN RLRRFSRFET NRTDETPTRS SWLENQPS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 3.0e-42 | 66 | 390 | 335 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005623 | cell |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84601.1 | 0 | 62 | 466 | 60 | 460 | unknown [Zea mays] |
| RefSeq | NP_001049980.1 | 0 | 1 | 468 | 1 | 468 | Os03g0324700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001131151.1 | 0 | 74 | 466 | 1 | 389 | hypothetical protein LOC100192459 [Zea mays] |
| RefSeq | NP_001136572.1 | 0 | 51 | 468 | 41 | 453 | hypothetical protein LOC100216694 [Zea mays] |
| RefSeq | XP_002467934.1 | 0 | 51 | 466 | 47 | 460 | hypothetical protein SORBIDRAFT_01g036720 [Sorghum bicolor] |
