| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g22790.1 |
| Family | GH14 |
| Protein Properties | Length: 525 Molecular Weight: 54663.6 Isoelectric Point: 6.3823 |
| Chromosome | Chromosome/Scaffold: 3 Start: 13161913 End: 13164014 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 86 | 476 | 0 |
| FVGLPSDVVTADGRAVNRGKAVSAGLRALKLLGVDGVELPVSWAVTQPGPTGDELGWAGYLAVAAMVRDAGLCLRVSLDTHGSALPAWVAAAAAADPDIL FADRSGNRRDGCLSFAVDELPVLGGKSPLQAYEAFFRSFAAAFHDFLGSTVTDVTVSLGPNGELKYPSYPPGSDGAGGYGGAGEFQCYDRHMLARLKRHA VAAGQPLWGLSGPHDAPRYGESPESSTFFRSPGGSWETAYGGFFLSWYAGELLAHGDRVLAAARRVFDGEPVELSAKVPLPRSRPAEATAGLHGGYGPVA EMFARRGCTVIASGMDGSAAAAAVLAQVKAACAEHGARLAGESASLAVARDGDGAPGAWGGLLAAERTRPCHFTYQRMGAEFFSPDHWPLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 525 Download |
| MEAVLMQQAA AAAAVVARPA RRRCTGEEVV GGRRPGLVRL GFARRRWSRL RLSPARAHLA 60 VDRSREAGEE AAAVVEEEGE AAVRLFVGLP SDVVTADGRA VNRGKAVSAG LRALKLLGVD 120 GVELPVSWAV TQPGPTGDEL GWAGYLAVAA MVRDAGLCLR VSLDTHGSAL PAWVAAAAAA 180 DPDILFADRS GNRRDGCLSF AVDELPVLGG KSPLQAYEAF FRSFAAAFHD FLGSTVTDVT 240 VSLGPNGELK YPSYPPGSDG AGGYGGAGEF QCYDRHMLAR LKRHAVAAGQ PLWGLSGPHD 300 APRYGESPES STFFRSPGGS WETAYGGFFL SWYAGELLAH GDRVLAAARR VFDGEPVELS 360 AKVPLPRSRP AEATAGLHGG YGPVAEMFAR RGCTVIASGM DGSAAAAAVL AQVKAACAEH 420 GARLAGESAS LAVARDGDGA PGAWGGLLAA ERTRPCHFTY QRMGAEFFSP DHWPLFVQLV 480 RAMECPEEAH EDDLPAAAGD GGRLAVPSGG RAAEDATAKQ AQTV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 9.0e-41 | 85 | 395 | 333 | + beta-amylase | ||
| PLN02801 | PLN02801 | 2.0e-49 | 85 | 392 | 331 | + beta-amylase | ||
| PLN02161 | PLN02161 | 2.0e-49 | 85 | 483 | 439 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-63 | 85 | 490 | 439 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-73 | 85 | 518 | 474 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0003824 | catalytic activity |
| GO:0005488 | binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95933.1 | 0 | 1 | 524 | 1 | 524 | Glycosyl hydrolase family 14 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001050116.1 | 0 | 133 | 524 | 305 | 696 | Os03g0351300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151271.1 | 0 | 21 | 524 | 19 | 537 | beta-amylase [Zea mays] |
| RefSeq | XP_002463351.1 | 0 | 23 | 514 | 7 | 529 | hypothetical protein SORBIDRAFT_02g042220 [Sorghum bicolor] |
| RefSeq | XP_002467860.1 | 0 | 83 | 524 | 85 | 529 | hypothetical protein SORBIDRAFT_01g035370 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 83 | 514 | 6 | 468 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1fa2_A | 0 | 83 | 483 | 13 | 443 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1wdr_A | 0 | 83 | 429 | 12 | 382 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1q6g_A | 0 | 83 | 429 | 12 | 382 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1q6d_A | 0 | 83 | 429 | 12 | 382 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CB675455 | 259 | 87 | 345 | 0 |
| CB655989 | 238 | 164 | 401 | 0 |
| CB644916 | 235 | 136 | 370 | 0 |
| CB669108 | 231 | 87 | 317 | 0 |
| CX102176 | 178 | 181 | 358 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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