| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g25790.1 |
| Family | CBM43 |
| Protein Properties | Length: 479 Molecular Weight: 47908.9 Isoelectric Point: 6.3882 |
| Chromosome | Chromosome/Scaffold: 3 Start: 14759852 End: 14767857 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 267 | 348 | 2.4e-29 |
| CVALQNADAAALQAGLNWACGPGQADCAAIQPGGACYKQNNLPALASYAYNDYYQKMASTGATCSFNGTATTTTADPSSGSC | |||
| GH17 | 36 | 196 | 5.3e-31 |
| NSPSEFAKIVQSKQTKHARVFIGGGDHRSLRSLANTGEEVILTVPNDQLEHMAEFPEEAELWVAANVARFLPATRITHVVAGDDVVARSPGNAYFLLPAM ANLHAALAASRLDGRVKVSSAVSGAALQAPPAWAAAAVAGGLLRFLNATGAPLFLKTRPSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 479 Download |
| MMLDRRWRGT ILLLICLVCN ASGTYVGANT IPSPENSPSE FAKIVQSKQT KHARVFIGGG 60 DHRSLRSLAN TGEEVILTVP NDQLEHMAEF PEEAELWVAA NVARFLPATR ITHVVAGDDV 120 VARSPGNAYF LLPAMANLHA ALAASRLDGR VKVSSAVSGA ALQAPPAWAA AAVAGGLLRF 180 LNATGAPLFL KTRPSESTDT MVDAAYGAMR ALGFPGGAIP VIAAPVETEE FGGGATTVVY 240 HSYLLQASGG VGGGERRSLA TSAGMFCVAL QNADAAALQA GLNWACGPGQ ADCAAIQPGG 300 ACYKQNNLPA LASYAYNDYY QKMASTGATC SFNGTATTTT ADPSSGSCVF TGSSMAGGSN 360 TSVPGASPPT TLSPPAGLTP PVGTSPPTDF SPPAAGTTPP AGGFTPPAGG FGTPPLGGFG 420 TPPSGFGPPG SFNGSGSSFG PSSAFSPYGG AGHRDGGASG ARLAAAALAV LLLSVDLM* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-9 | 28 | 238 | 250 | + Glycosyl hydrolases family 17. | ||
| pfam07983 | X8 | 4.0e-11 | 267 | 337 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-27 | 266 | 350 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH01358.1 | 0 | 37 | 360 | 44 | 463 | unnamed protein product [Oryza sativa Japonica Group] |
| GenBank | EEC75349.1 | 0 | 1 | 352 | 1 | 352 | hypothetical protein OsI_11774 [Oryza sativa Indica Group] |
| GenBank | EEE67465.1 | 0 | 20 | 360 | 82 | 520 | hypothetical protein OsJ_24859 [Oryza sativa Japonica Group] |
| RefSeq | NP_001050214.1 | 0 | 1 | 478 | 1 | 478 | Os03g0374600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002467792.1 | 0 | 35 | 450 | 4 | 397 | hypothetical protein SORBIDRAFT_01g034190 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0.000000000000002 | 38 | 194 | 15 | 175 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 2jon_A | 0.0000000000006 | 262 | 350 | 9 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3f55_D | 0.000000000009 | 44 | 194 | 20 | 179 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3f55_C | 0.000000000009 | 44 | 194 | 20 | 179 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3f55_B | 0.000000000009 | 44 | 194 | 20 | 179 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
