| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g27980.1 |
| Family | CBM43 |
| Protein Properties | Length: 493 Molecular Weight: 51905.9 Isoelectric Point: 7.1359 |
| Chromosome | Chromosome/Scaffold: 3 Start: 16071005 End: 16072780 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 372 | 453 | 7e-24 |
| WCVLRPDASPADPAIGGAVGYACQYADCTSLGAGSSCGGLDARGNVSYAFNQFFQAANQMKGSCNFNNLSMITTSDPSQGTC | |||
| GH17 | 30 | 352 | 0 |
| AANWGTRALHPLPGDVTVRLLRDNGFDKVKLFEADPSALRALGHTGIQVMVGLPNELLAPVSSSVAAAEQWVLHNVSSYISKLGVDIRAVAVGNEPFLKS YKGKFEAATLPAVQNVQAALVKAGLARQVRVTVPLNADVYESLDGRPSAGDFRPDIAGLMVGLVRFLLDNGGFLTINIYPFLSLQADPNFPADYAYFPSP GSPPSQASVQDGGVLYTNVFDANYDTLISALEKHGLGAIAVVVGEIGWPTDGDKSANAANAQRFNQGLFDRILAGKGTPRRPQMPDVYVFALLDEDAKSI DPGSFERHWGVFNYDGSRKYNLR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 493 Download |
| MGSCARVHAL AVAWAVAALL SRATPAGALA ANWGTRALHP LPGDVTVRLL RDNGFDKVKL 60 FEADPSALRA LGHTGIQVMV GLPNELLAPV SSSVAAAEQW VLHNVSSYIS KLGVDIRAVA 120 VGNEPFLKSY KGKFEAATLP AVQNVQAALV KAGLARQVRV TVPLNADVYE SLDGRPSAGD 180 FRPDIAGLMV GLVRFLLDNG GFLTINIYPF LSLQADPNFP ADYAYFPSPG SPPSQASVQD 240 GGVLYTNVFD ANYDTLISAL EKHGLGAIAV VVGEIGWPTD GDKSANAANA QRFNQGLFDR 300 ILAGKGTPRR PQMPDVYVFA LLDEDAKSID PGSFERHWGV FNYDGSRKYN LRLAGGRSIA 360 PARGVRYLSR QWCVLRPDAS PADPAIGGAV GYACQYADCT SLGAGSSCGG LDARGNVSYA 420 FNQFFQAANQ MKGSCNFNNL SMITTSDPSQ GTCRFQIEID TGRHDLAVAS SASAAATSVA 480 AVLLLALLGL VI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-6 | 266 | 344 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 6.0e-15 | 371 | 442 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-30 | 371 | 455 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-66 | 40 | 351 | 314 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP12947.1 | 0 | 1 | 471 | 1 | 471 | putative 1,3-beta-glucanase [Oryza sativa Japonica Group] |
| GenBank | EAY90344.1 | 0 | 1 | 471 | 1 | 471 | hypothetical protein OsI_11921 [Oryza sativa Indica Group] |
| RefSeq | NP_001147933.1 | 0 | 22 | 475 | 23 | 476 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
| RefSeq | XP_002467735.1 | 0 | 22 | 491 | 23 | 497 | hypothetical protein SORBIDRAFT_01g033200 [Sorghum bicolor] |
| RefSeq | XP_002516181.1 | 0 | 29 | 491 | 42 | 498 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 44 | 341 | 16 | 294 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
| PDB | 1aq0_B | 0 | 44 | 341 | 16 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 44 | 341 | 16 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1ghs_B | 1.00053e-42 | 40 | 353 | 13 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 1.00053e-42 | 40 | 353 | 13 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
