y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os03g30830.1 |
Family | CBM43 |
Protein Properties | Length: 189 Molecular Weight: 18367.6 Isoelectric Point: 4.1946 |
Chromosome | Chromosome/Scaffold: 3 Start: 17569732 End: 17572178 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 26 | 106 | 1.5e-28 |
CVCRSEQPTALLQKAIDYSCGQGADCTSILSSGGCYNPNTVAAHCSWAANSYFQKFRASGATCDFGGAATLSSSDPSFSGC |
Full Sequence |
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Protein Sequence Length: 189 Download |
MESAAALALV LAVLLLSSTL AASDFCVCRS EQPTALLQKA IDYSCGQGAD CTSILSSGGC 60 YNPNTVAAHC SWAANSYFQK FRASGATCDF GGAATLSSSD PSFSGCTFPS SASAAGTTGL 120 SPGVGTGTGT LSPGGGIGTG TNGTGMGSAL SPPGTSNFDG AAAEAGLLPR AEPAIFFTVL 180 LLSFLALP* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-18 | 26 | 95 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-33 | 25 | 108 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0005575 | cellular_component |
GO:0008150 | biological_process |
GO:0016020 | membrane |
GO:0030246 | carbohydrate binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ04609.1 | 0 | 7 | 182 | 1 | 186 | hypothetical protein OsI_26758 [Oryza sativa Indica Group] |
GenBank | EAZ40556.1 | 1.4013e-45 | 16 | 113 | 13 | 110 | hypothetical protein OsJ_25011 [Oryza sativa Japonica Group] |
RefSeq | NP_001050386.1 | 0 | 24 | 188 | 24 | 188 | Os03g0421800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060198.1 | 1.4013e-45 | 16 | 187 | 13 | 193 | Os07g0600700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002465118.1 | 0 | 17 | 187 | 18 | 193 | hypothetical protein SORBIDRAFT_01g032330 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-16 | 21 | 110 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |