Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os03g40330.1 |
Family | GH17 |
Protein Properties | Length: 216 Molecular Weight: 22849.9 Isoelectric Point: 7.7469 |
Chromosome | Chromosome/Scaffold: 3 Start: 22424025 End: 22424841 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 134 | 211 | 7.3e-29 |
IYSAMEKEGGSDVPVVISETGWPSADGRGASKDNARVYNQNLINHVGKGTPKRPVALETYIFAMFDENQKKGDAIERN | |||
GH17 | 1 | 133 | 1.4e-36 |
MRIYLPNDTILHALRGTRIAVVLDAPDVRSLASNDATNASSSAAQAWVQANVRPYYPDVNIKYIAVGNEVKDGADKPKILPAMNNIRDALSAAGLGGHIK VSTAVEMSLVAGSPLPSGSAFADPPSIMGPIVN |
Full Sequence |
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Protein Sequence Length: 216 Download |
MRIYLPNDTI LHALRGTRIA VVLDAPDVRS LASNDATNAS SSAAQAWVQA NVRPYYPDVN 60 IKYIAVGNEV KDGADKPKIL PAMNNIRDAL SAAGLGGHIK VSTAVEMSLV AGSPLPSGSA 120 FADPPSIMGP IVNIYSAMEK EGGSDVPVVI SETGWPSADG RGASKDNARV YNQNLINHVG 180 KGTPKRPVAL ETYIFAMFDE NQKKGDAIER NKFTS* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
COG5309 | COG5309 | 2.0e-7 | 53 | 203 | 175 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] |
pfam00332 | Glyco_hydro_17 | 3.0e-66 | 1 | 211 | 269 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005488 | binding |
GO:0005618 | cell wall |
GO:0005773 | vacuole |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP12921.1 | 0 | 1 | 215 | 1 | 218 | putative beta-1,3-glucanase [Oryza sativa Japonica Group] |
GenBank | ABF97482.1 | 0 | 1 | 215 | 1 | 215 | Glycosyl hydrolases family 17 protein [Oryza sativa (japonica cultivar-group)] |
DDBJ | BAH92255.1 | 0 | 1 | 169 | 1 | 225 | Os03g0600500 [Oryza sativa Japonica Group] |
GenBank | EAY90914.1 | 0 | 1 | 211 | 60 | 307 | hypothetical protein OsI_12531 [Oryza sativa Indica Group] |
RefSeq | NP_001050619.1 | 0 | 1 | 215 | 1 | 271 | Os03g0600600 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 1 | 210 | 30 | 289 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 1 | 210 | 30 | 289 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 1 | 211 | 32 | 298 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 1 | 211 | 32 | 298 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur7_B | 0 | 1 | 211 | 32 | 298 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CN124833 | 184 | 53 | 211 | 0 |
CJ964835 | 213 | 56 | 211 | 5.60519e-45 |
CJ957912 | 213 | 56 | 211 | 9.80909e-45 |
CJ960024 | 265 | 4 | 211 | 9.80909e-45 |
CJ962565 | 209 | 60 | 211 | 2.99878e-43 |
Sequence Alignments (This image is cropped. Click for full image.) |
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