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Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os03g46660.1 |
Family | CBM43 |
Protein Properties | Length: 519 Molecular Weight: 54134.3 Isoelectric Point: 5.4056 |
Chromosome | Chromosome/Scaffold: 3 Start: 26407700 End: 26410691 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 430 | 512 | 3.8e-32 |
WCVASAGATEADLQADLDYACAQVGVDCGAIQAGGACFEPNTVRAHAAYAMNQLYQAAGRHPWNCDFRSSATLTSDNPSYGSC | |||
GH17 | 83 | 400 | 0 |
IGVNYGEVADNLPAPEETAKLLKSTTISKVRLYGVDPGIMRALAGTGISLVVGVANGDIPSLAADPAAASRWLAANVLPFVPASTISVVAVGNEVLESGD ASLAAALLPAMQNLRAAAAAAGDGAARIKFSTVNTMAVLAQSDPPSTGAFHPDISPQLTQILGFLSKTTAPFMINPYPYFAYQSDPRPETLAFCLFQPNA GRVDAGSKIKYTNMFDAQVDAVKSALGRAGYGDVEIVVAETGWPTRGDAGEAGATADNARAYVSNLVSHLRSGAGTPLMPGKPVDTYLFALYDEDLKPGP TSERSFGLYHTDLTMAYD |
Full Sequence |
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Protein Sequence Length: 519 Download |
MIWSASVPWV VVIAVFTLHA TLGRRVHIFF VRLLLLLLLS HFSFLLWARR ELESMEAESR 60 KLLLALAVSL CCFVAASRAQ SYIGVNYGEV ADNLPAPEET AKLLKSTTIS KVRLYGVDPG 120 IMRALAGTGI SLVVGVANGD IPSLAADPAA ASRWLAANVL PFVPASTISV VAVGNEVLES 180 GDASLAAALL PAMQNLRAAA AAAGDGAARI KFSTVNTMAV LAQSDPPSTG AFHPDISPQL 240 TQILGFLSKT TAPFMINPYP YFAYQSDPRP ETLAFCLFQP NAGRVDAGSK IKYTNMFDAQ 300 VDAVKSALGR AGYGDVEIVV AETGWPTRGD AGEAGATADN ARAYVSNLVS HLRSGAGTPL 360 MPGKPVDTYL FALYDEDLKP GPTSERSFGL YHTDLTMAYD AGLTSSSGGA ASPSNGGASQ 420 QQPRGGGGGW CVASAGATEA DLQADLDYAC AQVGVDCGAI QAGGACFEPN TVRAHAAYAM 480 NQLYQAAGRH PWNCDFRSSA TLTSDNPSYG SCVYTGGQ* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-13 | 103 | 394 | 302 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-21 | 430 | 501 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-39 | 430 | 514 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-95 | 83 | 400 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005488 | binding |
GO:0005623 | cell |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY91326.1 | 0 | 55 | 518 | 1 | 464 | hypothetical protein OsI_12942 [Oryza sativa Indica Group] |
RefSeq | NP_001050864.1 | 0 | 55 | 518 | 1 | 464 | Os03g0669300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148381.1 | 0 | 72 | 517 | 18 | 459 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
RefSeq | XP_002466692.1 | 0 | 68 | 517 | 20 | 473 | hypothetical protein SORBIDRAFT_01g012380 [Sorghum bicolor] |
RefSeq | XP_002509479.1 | 0 | 77 | 517 | 22 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 83 | 404 | 2 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_C | 0 | 83 | 404 | 2 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_B | 0 | 83 | 404 | 2 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_A | 0 | 83 | 404 | 2 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3em5_D | 0 | 83 | 404 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |