| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g48560.1 |
| Family | GT14 |
| Protein Properties | Length: 450 Molecular Weight: 48799.8 Isoelectric Point: 7.6407 |
| Chromosome | Chromosome/Scaffold: 3 Start: 27678462 End: 27681754 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 81 | 342 | 0 |
| FAYLISGSAGDAPMMRRCLLALYHPRNSYILHLDAEAPDDDRAGLAAFVAAHPALSAAANVRVIRKANLVTYRGPTMVTTTLHAAAAFLWGRGGGRGADW DWFINLSASDYPLVTQDDLMHVFSKLPRDLNFIDHTSDIGWKAFARAMPMIVDPALYMKTKGELFWIPERRSLPTAFKLFTGSAWMVLSRPFVEYLIWGW DNLPRTVLMYYANFISSPEGYFHTVACNAGEFRNTTVNSDLHFISWDNPPMQHPHYLADADW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 450 Download |
| MDTHAVPRAA ATVDLRWLLS VAAGAVFALL LLLAASPPFP LRPASLFTTT SPRRALPPLF 60 VESSSTLSAP PPTPPPSPPR FAYLISGSAG DAPMMRRCLL ALYHPRNSYI LHLDAEAPDD 120 DRAGLAAFVA AHPALSAAAN VRVIRKANLV TYRGPTMVTT TLHAAAAFLW GRGGGRGADW 180 DWFINLSASD YPLVTQDDLM HVFSKLPRDL NFIDHTSDIG WKAFARAMPM IVDPALYMKT 240 KGELFWIPER RSLPTAFKLF TGSAWMVLSR PFVEYLIWGW DNLPRTVLMY YANFISSPEG 300 YFHTVACNAG EFRNTTVNSD LHFISWDNPP MQHPHYLADA DWGPMLASGA PFARKFRRDD 360 SVLDRIDADL LSRRPGMVAP GAWCGAAAAA DGDSNSTTTG GAVDPCGVAG GGGEAVRPGP 420 GAERLQRLVA SLLSEENFRP RQCKVVEAN* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 9.0e-62 | 81 | 333 | 256 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 2.0e-155 | 80 | 376 | 297 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0009058 | biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACO87683.1 | 0 | 59 | 444 | 51 | 424 | b-1-3-galactosyl-o-glycosyl-glycoprotein [Brachypodium sylvaticum] |
| GenBank | EEC75982.1 | 0 | 103 | 449 | 82 | 428 | hypothetical protein OsI_13099 [Oryza sativa Indica Group] |
| RefSeq | NP_001050958.1 | 0 | 1 | 449 | 1 | 449 | Os03g0692000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001147735.1 | 0 | 54 | 449 | 63 | 455 | BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein [Zea mays] |
| RefSeq | XP_002466639.1 | 0 | 34 | 447 | 46 | 455 | hypothetical protein SORBIDRAFT_01g011480 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.000001 | 94 | 302 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.000001 | 94 | 302 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.000001 | 94 | 302 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.000001 | 94 | 302 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000004 | 94 | 302 | 98 | 285 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
