| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g53730.1 |
| Family | AA6 |
| Protein Properties | Length: 253 Molecular Weight: 26241 Isoelectric Point: 8.6999 |
| Chromosome | Chromosome/Scaffold: 3 Start: 30807648 End: 30808709 |
| Description | Quinone reductase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA6 | 45 | 246 | 0 |
| RIYVVFYSMYGHVRLLARAVARGVGSVPGARAILFRVPETLPPAVLARMEADDGGGGGDGEDVIPVVDPDGLPDADGFLFGFPARFGAMPAQMQAFFDST VPLCRHQRLAGKPAGLFVSTGTQAGGQETTAWTAITQLAHHGMLFVPIGYTFGEGMLEMGELRGGSPYGAGVFSGDGSRPPSELELALAEHHGKYMATLV KK | |||
| Full Sequence |
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| Protein Sequence Length: 253 Download |
| MGKGGGCIPS KRHRAAAAAA APASHSHQRE RTSIPAPAAA PRPVRIYVVF YSMYGHVRLL 60 ARAVARGVGS VPGARAILFR VPETLPPAVL ARMEADDGGG GGDGEDVIPV VDPDGLPDAD 120 GFLFGFPARF GAMPAQMQAF FDSTVPLCRH QRLAGKPAGL FVSTGTQAGG QETTAWTAIT 180 QLAHHGMLFV PIGYTFGEGM LEMGELRGGS PYGAGVFSGD GSRPPSELEL ALAEHHGKYM 240 ATLVKKMVHG AS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00258 | Flavodoxin_1 | 0.002 | 48 | 163 | 121 | + Flavodoxin. | ||
| pfam03358 | FMN_red | 7.0e-7 | 118 | 194 | 77 | + NADPH-dependent FMN reductase. | ||
| COG0655 | WrbA | 2.0e-25 | 44 | 249 | 209 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 5.0e-39 | 44 | 247 | 205 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 1.0e-49 | 44 | 248 | 206 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000166 | nucleotide binding |
| GO:0003824 | catalytic activity |
| GO:0005886 | plasma membrane |
| GO:0006139 | nucleobase-containing compound metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU23836.1 | 0 | 1 | 247 | 1 | 252 | unknown [Glycine max] |
| RefSeq | NP_001051269.1 | 0 | 1 | 252 | 1 | 252 | Os03g0748500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002280986.1 | 0 | 1 | 247 | 1 | 248 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306085.1 | 0 | 1 | 247 | 1 | 255 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519089.1 | 0 | 1 | 247 | 1 | 253 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dy4_C | 0 | 45 | 247 | 2 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 4dy4_A | 0 | 45 | 247 | 2 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_B | 0 | 45 | 247 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_A | 0 | 45 | 247 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6k_B | 0 | 45 | 247 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| JK988466 | 250 | 1 | 249 | 0 |
| EB451602 | 250 | 1 | 250 | 0 |
| DY942461 | 244 | 1 | 241 | 0 |
| FS328816 | 252 | 1 | 247 | 0 |
| JG479535 | 271 | 1 | 247 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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