| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g57880.3 |
| Family | CBM43 |
| Protein Properties | Length: 492 Molecular Weight: 52782.8 Isoelectric Point: 4.5193 |
| Chromosome | Chromosome/Scaffold: 3 Start: 32970882 End: 32973317 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 377 | 458 | 3.7e-26 |
| WCVINTNAKDTSKLADNINFACTFADCTALGYGSTCAGMDANGNASYAFNAYFQVQNQKDDACDFQGLAMPTQTDPSTPACN | |||
| GH17 | 34 | 354 | 0 |
| LGMNWGTQASHPLPPKIVAQLLQDNGIKKVKLFDADQDTLSALAGTGIEVMVAIPNVMLDSITDYDTAKEWVRRNVSRYNFDGGVTIKYVAVGNEPFLAA YNGTFDKVTLPALMNIQNALNDAGLGDSIKATVPLNADVYDSPQDQQVPSAGRFRADIADLMTQMVQFLANNSAPFTVNIYPFISLYLNDDFPVDFAFFD GGATPVVDNGISYTNVFDANFDTLVAALKGVGHGDMPIVVGEVGWPTDGDKHATATYAQRFYNGLLKRLAANAGTPARPGQYIEVYLFGLLDEDAKSVAP GDFERHWGILRFDGQPKYPVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 492 Download |
| MADLAVLQWW LGAMVAMAAA ASWSGGVLPA AEALGMNWGT QASHPLPPKI VAQLLQDNGI 60 KKVKLFDADQ DTLSALAGTG IEVMVAIPNV MLDSITDYDT AKEWVRRNVS RYNFDGGVTI 120 KYVAVGNEPF LAAYNGTFDK VTLPALMNIQ NALNDAGLGD SIKATVPLNA DVYDSPQDQQ 180 VPSAGRFRAD IADLMTQMVQ FLANNSAPFT VNIYPFISLY LNDDFPVDFA FFDGGATPVV 240 DNGISYTNVF DANFDTLVAA LKGVGHGDMP IVVGEVGWPT DGDKHATATY AQRFYNGLLK 300 RLAANAGTPA RPGQYIEVYL FGLLDEDAKS VAPGDFERHW GILRFDGQPK YPVDLTGQGQ 360 NTMLVPAKGV TYLPRTWCVI NTNAKDTSKL ADNINFACTF ADCTALGYGS TCAGMDANGN 420 ASYAFNAYFQ VQNQKDDACD FQGLAMPTQT DPSTPACNFT IQIAATSAGH RRRAGAAVLA 480 LLALFRLFLL H* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00925 | GTP_cyclohydro2 | 0.008 | 50 | 88 | 39 | + GTP cyclohydrolase II. GTP cyclohydrolase II catalyzes the first committed step in the biosynthesis of riboflavin. | ||
| COG5309 | COG5309 | 7.0e-5 | 228 | 346 | 123 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-19 | 376 | 446 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-32 | 376 | 459 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-73 | 34 | 354 | 326 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29689.1 | 0 | 31 | 468 | 18 | 457 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
| DDBJ | BAF13440.2 | 0 | 121 | 472 | 29 | 380 | Os03g0792800 [Oryza sativa Japonica Group] |
| RefSeq | NP_001051526.1 | 0 | 29 | 491 | 29 | 491 | Os03g0792800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002459388.1 | 0 | 31 | 468 | 26 | 464 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
| RefSeq | XP_002463758.1 | 0 | 4 | 472 | 5 | 473 | hypothetical protein SORBIDRAFT_01g005610 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 34 | 356 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_C | 0 | 34 | 356 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_B | 0 | 34 | 356 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3f55_A | 0 | 34 | 356 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3em5_D | 0 | 34 | 356 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
