| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os03g61780.2 |
| Family | CBM43 |
| Protein Properties | Length: 575 Molecular Weight: 58753.8 Isoelectric Point: 8.2725 |
| Chromosome | Chromosome/Scaffold: 3 Start: 35025973 End: 35028771 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 376 | 457 | 2.2e-35 |
| WCVAKAGLMDAALQSGLDYACGMGGADCTAIQPMGACYNPNTLQAHASYAFNSYFQRNPSPASCDFGGAGMLVNINPSSGTC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 575 Download |
| MATSWSVAFT IFFSCILLLE TISSSASLDC SYGSAQVKIL SSSVVSEQQN VYLFLKPFQS 60 TRSCSARRLA GEFVNGVVVP NLRLNVTGVV VTANERQLGA LRCTLESVQA ELAVAGLGRS 120 VKVSPELSLP SLRAMAKCRR RGEKHWRRVM EFVRRSGSFV VVEMGAEEKA DLAVADVAAA 180 FEEGVGVAFR ISGRAARSAA EMARLIGDAD KGRRWTGVLA EVASPSPRRE LAAAARTTAR 240 DVFAPVTNPT TTPATNPVTV PATNPAMNPV TPGIVTVPST NPATGYSNNP NLPPLYPEPT 300 PVTMPDPTTT TTPTPFMNPV TAPTMPSPVT NPATTPAVTN PTTMPYPYPP QQGGVMPTTP 360 TYQPPATMPA AGGQTWCVAK AGLMDAALQS GLDYACGMGG ADCTAIQPMG ACYNPNTLQA 420 HASYAFNSYF QRNPSPASCD FGGAGMLVNI NPSSGTCLFQ ASSAGYGAGY SPGVTGTVPV 480 GGGAGAGAGV GVGVTPMGPA VGGTGGAGVT PMGPAVGGGS GSTVLNANSP GGNSMYGSDS 540 NPTSLTGAAA AALSSGWVLC LVWIFTFAYV KEKV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-20 | 375 | 446 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-39 | 375 | 459 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005623 | cell |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAR88597.1 | 0 | 1 | 574 | 1 | 594 | putative glucanase [Oryza sativa Japonica Group] |
| GenBank | ABF99730.1 | 0 | 1 | 574 | 1 | 574 | expressed protein [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABF99731.1 | 0 | 1 | 574 | 1 | 575 | expressed protein [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACN28414.1 | 0 | 2 | 574 | 3 | 613 | unknown [Zea mays] |
| RefSeq | XP_002463588.1 | 0 | 1 | 574 | 1 | 615 | hypothetical protein SORBIDRAFT_01g002540 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-18 | 365 | 463 | 3 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
