| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os04g04240.1 |
| Family | GT1 |
| Protein Properties | Length: 356 Molecular Weight: 39072.6 Isoelectric Point: 6.5043 |
| Chromosome | Chromosome/Scaffold: 4 Start: 1974680 End: 1981816 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 42 | 286 | 1.4013e-45 |
| RKKKLKLRPVTYLSGAQGSGNDIPHGYIWSPHLVPKPKDWGLKIDVVGFCFLDLASNYVPPEPLIKWLEAGDKPIYVGFGSLPVQDPAKMTEVIVKALEI TGQRGIINKGWGGLGTLAEPKDFVYLLDNCPHDWLFLQCKAVLLIMSSFHGVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARGVGPLPIPVDQ FSLRKLVDAINFMMEPKVKEKAVELAKAMESEDGVSGVVRAFLRH | |||
| Full Sequence |
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| Protein Sequence Length: 356 Download |
| MEAEVASALV GTCMPCNQFV LSYQIVDSMI WLGIRDMINE FRKKKLKLRP VTYLSGAQGS 60 GNDIPHGYIW SPHLVPKPKD WGLKIDVVGF CFLDLASNYV PPEPLIKWLE AGDKPIYVGF 120 GSLPVQDPAK MTEVIVKALE ITGQRGIINK GWGGLGTLAE PKDFVYLLDN CPHDWLFLQC 180 KAVLLIMSSF HGVHHGGAGT TAAGLKAACP TTIVPFFGDQ PFWGDRVHAR GVGPLPIPVD 240 QFSLRKLVDA INFMMEPKVK EKAVELAKAM ESEDGVSGVV RAFLRHLPLR AEETTPQPTS 300 SFLEFLGPFS FYDIFHVMAL QAIVALYMCQ YHLEASLSVS SRVIILVDPT AEGIC* 360 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 6.0e-9 | 98 | 252 | 155 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 8.0e-56 | 14 | 286 | 273 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000003 | reproduction |
| GO:0005886 | plasma membrane |
| GO:0006629 | lipid metabolic process |
| GO:0008152 | metabolic process |
| GO:0009791 | post-embryonic development |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH92472.1 | 0 | 1 | 310 | 1 | 310 | Os04g0131850 [Oryza sativa Japonica Group] |
| EMBL | CAD39328.2 | 0 | 1 | 310 | 1 | 301 | OSJNBb0080H08.20 [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC76698.1 | 0 | 19 | 310 | 321 | 603 | hypothetical protein OsI_14701 [Oryza sativa Indica Group] |
| GenBank | EEE60429.1 | 0 | 1 | 310 | 1 | 290 | hypothetical protein OsJ_13634 [Oryza sativa Japonica Group] |
| GenBank | EEE60430.1 | 0 | 19 | 322 | 321 | 615 | hypothetical protein OsJ_13635 [Oryza sativa Japonica Group] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 1e-20 | 105 | 287 | 213 | 381 | A Chain A, Crystal Structure Of The Putative Acetylxylan Esterase From Clostridium Acetobutylicum, Northeast Structural Genomics Target Car6 |
| PDB | 3h4i_A | 1e-20 | 105 | 287 | 213 | 381 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 3e-17 | 105 | 304 | 230 | 409 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 7e-16 | 100 | 267 | 225 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 7e-16 | 100 | 267 | 225 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT047897 | 294 | 19 | 310 | 0 |
| GT048365 | 294 | 19 | 310 | 0 |
| FL853899 | 229 | 19 | 247 | 0 |
| FC893365 | 280 | 29 | 302 | 0 |
| DV466557 | 257 | 19 | 275 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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