| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os04g04254.2 |
| Family | GT1 |
| Protein Properties | Length: 587 Molecular Weight: 63355.6 Isoelectric Point: 6.3327 |
| Chromosome | Chromosome/Scaffold: 4 Start: 1985638 End: 1997936 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 149 | 556 | 0 |
| TRGDVQPFIAIGKRLQDYGHRVRLATHANFKEFVLTAGLEFFPLGGDPKILAEYMVKNKGFLPSGPSEIPIQRKQMKEIIFSLLPACKEPDPDTGIPFKV DAIIANPPAYGHTHVAEALKVPIHIFFTMPWTPTSEFPHPLSRVKQAAGYRLSYQIVDSMIWLGIRDMINEFRKKKLKLRPVTYLSGAQGSGNDIPHGYI WSPHLVPKPKDWGPKIDVVGFCFLDLASNYVPPEPLVKWLEAGDKPIYVGFGSLPVQDPAKMTEVIVKALEITGQRGIINKGWGGLGTLAEPKDFVYLLD NCPHDWLFLQCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARGVGPLPIPVDQFSLQKLVDAINFMMEPKVKDNAVELAKAMESEDGVSG AVRAFLRH | |||
| Full Sequence |
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| Protein Sequence Length: 587 Download |
| MASAAEEAKG VEEGGGGASA NGGDNPATAT ASASAAAAAS SSSPADDRGL PRSSTMPERR 60 RQNNPADDPT KQLFDDKISL KKKLEMLNRI ATVKDDGTVV VDVPSSLETS TTDGVAYDGY 120 SDVTVEEPLD GADISVRPPM DIVILIVGTR GDVQPFIAIG KRLQDYGHRV RLATHANFKE 180 FVLTAGLEFF PLGGDPKILA EYMVKNKGFL PSGPSEIPIQ RKQMKEIIFS LLPACKEPDP 240 DTGIPFKVDA IIANPPAYGH THVAEALKVP IHIFFTMPWT PTSEFPHPLS RVKQAAGYRL 300 SYQIVDSMIW LGIRDMINEF RKKKLKLRPV TYLSGAQGSG NDIPHGYIWS PHLVPKPKDW 360 GPKIDVVGFC FLDLASNYVP PEPLVKWLEA GDKPIYVGFG SLPVQDPAKM TEVIVKALEI 420 TGQRGIINKG WGGLGTLAEP KDFVYLLDNC PHDWLFLQCK AVVHHGGAGT TAAGLKAACP 480 TTIVPFFGDQ PFWGDRVHAR GVGPLPIPVD QFSLQKLVDA INFMMEPKVK DNAVELAKAM 540 ESEDGVSGAV RAFLRHLPSR AEETAPQQTS SFLEFLGPVS KCLGCS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 6.0e-32 | 139 | 561 | 434 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 1.0e-36 | 142 | 286 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 3.0e-120 | 140 | 556 | 421 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000003 | reproduction |
| GO:0005886 | plasma membrane |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006629 | lipid metabolic process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB06081.1 | 0 | 8 | 586 | 11 | 608 | UDP-glucose:sterol glucosyltransferase [Avena sativa] |
| GenBank | EEC76698.1 | 0 | 1 | 586 | 1 | 609 | hypothetical protein OsI_14701 [Oryza sativa Indica Group] |
| GenBank | EEE60430.1 | 0 | 1 | 579 | 1 | 602 | hypothetical protein OsJ_13635 [Oryza sativa Japonica Group] |
| RefSeq | NP_001052094.1 | 0 | 1 | 586 | 1 | 609 | Os04g0131900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151796.1 | 0 | 18 | 528 | 22 | 546 | LOC100285431 [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 8e-31 | 140 | 566 | 1 | 389 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 3h4i_A | 8e-31 | 140 | 566 | 1 | 389 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 9e-23 | 140 | 545 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 9e-23 | 140 | 545 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 6e-19 | 384 | 554 | 230 | 395 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO883166 | 332 | 104 | 435 | 0 |
| GT046352 | 335 | 149 | 483 | 0 |
| GT048365 | 318 | 272 | 587 | 0 |
| FL856100 | 274 | 176 | 449 | 0 |
| GT046352 | 32 | 476 | 507 | 0.00007 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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