| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os04g17650.1 |
| Family | GT4 |
| Protein Properties | Length: 781 Molecular Weight: 89165.2 Isoelectric Point: 6.5824 |
| Chromosome | Chromosome/Scaffold: 4 Start: 9661934 End: 9667057 |
| Description | sucrose synthase 6 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 572 | 739 | 0 |
| DRNKPIIFSMARLDKVKNITGLVEWYGQNKKLRDLVNLVVVAGLLDASQSKDREEIEEINKMHNLMDRYQLKGQIRWIKAQTDRVRNGELYRCIADTKGA FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHVNPINGREAGIKIADFFQKCKEDP | |||
| Full Sequence |
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| Protein Sequence Length: 781 Download |
| MASKLSFKRM DSIAETMPDA LRQSRYQMKR CFQRYVSKGK RLLKNQQLME ELEKSLDDKV 60 ENEKLVEGFL GYIICSTQEA VVLPPFVAFA VRMNPGIWEY VKVHSDDLSV EGITPSEYLK 120 FKETLYDEKW AKDDNSLEVD FGALDLSTPH LTLPSSIGNG LQFVSKFMSS KLGGKPESMK 180 PLLDYLLTLN YRGEKLMIND TIDTVSKLQT ALLLAEVFVS GLPKYTPYLK FEQRFQEWGL 240 EKGWGDTAER CKETLNCLSE VLQAPDPTNM EKFFSRVPSI FNIVIFSIHG YFGQEKVLGL 300 PDTGGQVVYI LDQVRAMEEE LLQRIKQQGL HVTPKILVLT RLIPDAKGTK CNVELEPVEN 360 TKYSHILRVP FKTEDGKDLR QWVSRFDIYP YLERYAQNSC AKILDILEGK PDLIIGNYTD 420 GNLVASLLSN KLCVTQGTIA HALEKTKYED SDVKWREMDQ KYHFSCQFTA DMISMNTSDF 480 IITSTYQEIA GSKEKPGQYE HHYAFTMPGL CRYATGINVF DPKFNIAAPG ADQSIYFPFT 540 QKQKRLTDLH PQIDELLYSK DDTDEHIGYL ADRNKPIIFS MARLDKVKNI TGLVEWYGQN 600 KKLRDLVNLV VVAGLLDASQ SKDREEIEEI NKMHNLMDRY QLKGQIRWIK AQTDRVRNGE 660 LYRCIADTKG AFVQPALYEA FGLTVIEAMN CGLPTFATNQ GGPAEIIIDG VSGFHVNPIN 720 GREAGIKIAD FFQKCKEDPS YWNKVSTAGL QRIYEWQRLW QEQGINRLGK PQQAWRLVRS 780 * 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02472 | sucr_P_syn_N | 7.0e-65 | 283 | 757 | 485 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
| cd03800 | GT1_Sucrose_synthase | 5.0e-112 | 282 | 758 | 481 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
| PLN00142 | PLN00142 | 0 | 1 | 757 | 760 | + sucrose synthase | ||
| TIGR02470 | sucr_synth | 0 | 25 | 757 | 736 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00862 | Sucrose_synth | 0 | 9 | 559 | 551 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0005985 | sucrose metabolic process |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF14223.2 | 0 | 1 | 777 | 1 | 777 | Os04g0249500 [Oryza sativa Japonica Group] |
| EMBL | CAE03896.2 | 0 | 1 | 755 | 1 | 755 | OSJNBb0026I12.4 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAE03984.3 | 0 | 1 | 777 | 1 | 777 | OSJNBa0033H08.16 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH66603.1 | 0 | 1 | 776 | 1 | 777 | H0211A12.6 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEC76883.1 | 0 | 1 | 755 | 1 | 755 | hypothetical protein OsI_15088 [Oryza sativa Indica Group] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s29_H | 0 | 9 | 757 | 10 | 756 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 3s29_G | 0 | 9 | 757 | 10 | 756 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 3s29_F | 0 | 9 | 757 | 10 | 756 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 3s29_E | 0 | 9 | 757 | 10 | 756 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 3s29_D | 0 | 9 | 757 | 10 | 756 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794519 | 752 | 9 | 757 | 0 |
| BU103683 | 766 | 7 | 769 | 0 |
| CX109054 | 601 | 104 | 704 | 0 |
| FG227316 | 455 | 280 | 734 | 0 |
| GO854345 | 323 | 29 | 351 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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