| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os04g23580.1 |
| Family | GT14 |
| Protein Properties | Length: 402 Molecular Weight: 44072.8 Isoelectric Point: 6.9378 |
| Chromosome | Chromosome/Scaffold: 4 Start: 13493211 End: 13498065 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 63 | 317 | 0 |
| FAYLISGTGGEAARVVRLLRAVYHPRNRYLLHLDAAAGAEERAELAAAVRGVRAWRERANVDVVGEGYAVDRAGPSALAAALHGAAVLLRVAADWDWFVT LSSSDYPLVTQDDLLYAFSSVPRDLNFIDHTSDLGWKEHERFEKLIVDPSLYMDRNSEILPATEPRQMPDAFKIFTGSPWVILSRNFTEHCVHGWDNLPR KLLMYFANTAYSMESYFQTVICNSSKFRNTTVNGDLRYFVWDDPPGLEPLVLDES | |||
| Full Sequence |
|---|
| Protein Sequence Length: 402 Download |
| MRPPARSPPR LAAAAAALAT SAALLLICGT WPASASGFGA YTASSSARRA SSTGGADAPP 60 PSFAYLISGT GGEAARVVRL LRAVYHPRNR YLLHLDAAAG AEERAELAAA VRGVRAWRER 120 ANVDVVGEGY AVDRAGPSAL AAALHGAAVL LRVAADWDWF VTLSSSDYPL VTQDDLLYAF 180 SSVPRDLNFI DHTSDLGWKE HERFEKLIVD PSLYMDRNSE ILPATEPRQM PDAFKIFTGS 240 PWVILSRNFT EHCVHGWDNL PRKLLMYFAN TAYSMESYFQ TVICNSSKFR NTTVNGDLRY 300 FVWDDPPGLE PLVLDESHFD DMVNSSAAFA RRFVDDSPVL KKIDKEILNR SSAVCASFSR 360 RRGMDVDSCS KWGDVNVLQP ARAGEQLRRF ISEISQTRGC S* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 1.0e-48 | 63 | 304 | 242 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 5.0e-104 | 61 | 394 | 340 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0009058 | biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF14321.2 | 0 | 1 | 401 | 1 | 401 | Os04g0301700 [Oryza sativa Japonica Group] |
| EMBL | CAE04680.2 | 0 | 1 | 401 | 1 | 424 | OSJNBb0018A10.9 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH66076.1 | 0 | 1 | 401 | 1 | 401 | H0215E01.4 [Oryza sativa (indica cultivar-group)] |
| RefSeq | NP_001052407.1 | 0 | 1 | 401 | 1 | 401 | Os04g0301700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002531062.1 | 0 | 60 | 394 | 47 | 381 | acetylglucosaminyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.00000000002 | 79 | 303 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.00000000002 | 79 | 303 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.00000000002 | 79 | 303 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.00000000002 | 79 | 303 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.00000000005 | 79 | 303 | 101 | 319 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
