| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os04g32670.1 |
| Family | GT47 |
| Protein Properties | Length: 421 Molecular Weight: 47475.6 Isoelectric Point: 6.788 |
| Chromosome | Chromosome/Scaffold: 4 Start: 19690552 End: 19694678 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 53 | 347 | 0 |
| RLKVFIYDLPRKYNKKMVNKDPRCLNHMFAAEIFMHRFLLSSAVRTLNPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAIQYISHKWPFWNRTDGA DHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQENHVCLKEGSITIPPYAPPQKMQAHLIPPDTPRSIFVYFRGLFYDTGNDPEGGYYARGA RASLWENFKNNPLFDISTDHPPTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVEEKDVPKLDTILTS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 421 Download |
| MGSRTVGWWL LAAAVVLAAA AADSGEAERA AEQHSERISG SAGDVLEDNP VGRLKVFIYD 60 LPRKYNKKMV NKDPRCLNHM FAAEIFMHRF LLSSAVRTLN PKEADWFYTP VYTTCDLTPA 120 GLPLPFKSPR VMRSAIQYIS HKWPFWNRTD GADHFFVVPH DFGACFHYQE EKAIERGILP 180 LLQRATLVQT FGQENHVCLK EGSITIPPYA PPQKMQAHLI PPDTPRSIFV YFRGLFYDTG 240 NDPEGGYYAR GARASLWENF KNNPLFDIST DHPPTYYEDM QRAVFCLCPL GWAPWSPRLV 300 EAVVFGCIPV IIADDIVLPF ADAIPWEEIG VFVEEKDVPK LDTILTSMPI DDILRKQRLL 360 ANPSMKQAML FPQPAQPRDA FHQILNGLAR KLPHPEGVYL QPSDKRLNWT AGPVGDLKAW 420 * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-88 | 53 | 348 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005794 | Golgi apparatus |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84255.1 | 0 | 31 | 420 | 38 | 427 | unknown [Zea mays] |
| DDBJ | BAD26319.1 | 0 | 32 | 420 | 45 | 433 | putative pectin-glucuronyltransferase [Oryza sativa Japonica Group] |
| RefSeq | NP_001052673.1 | 0 | 1 | 420 | 1 | 420 | Os04g0398600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149267.1 | 0 | 25 | 420 | 32 | 427 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | XP_002446363.1 | 0 | 30 | 420 | 40 | 430 | hypothetical protein SORBIDRAFT_06g014730 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
