| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os04g40500.1 |
| Family | GH5 |
| Protein Properties | Length: 553 Molecular Weight: 60686.9 Isoelectric Point: 5.4412 |
| Chromosome | Chromosome/Scaffold: 4 Start: 24060045 End: 24063819 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 37 | 348 | 1.8e-39 |
| VGADGRRVKLACANWASHLEPVAAEGLSRRGVGDIAARVAAMGFNCVRLTWPTYLATNATLASLPLRWSLERFGMRESVAGVRVNNPGLLDLPLIDVFQE VVSALARNNIMVILDNQMTTPGWCCSTTDGNGFFGDKYFDPEEWLNGLKTMATMFRKTKNVVGMSLRNELRGPYENVSLWYRYMKEGAESVHTANPDVLV ILSGLEFDNTLNFVVPNQIHLSFTGKLVFEQHWYGFSDGGNWESQNQNDVCGMVVGFIKNKGLFLLQQGWPLFFSEFGFDMSGTHTGDNRYLTCFLSVAA EMDLDWAIWALQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 553 Download |
| MASSACPTPL LLLLLPLAAA AASLPPLPLS TASRWVVGAD GRRVKLACAN WASHLEPVAA 60 EGLSRRGVGD IAARVAAMGF NCVRLTWPTY LATNATLASL PLRWSLERFG MRESVAGVRV 120 NNPGLLDLPL IDVFQEVVSA LARNNIMVIL DNQMTTPGWC CSTTDGNGFF GDKYFDPEEW 180 LNGLKTMATM FRKTKNVVGM SLRNELRGPY ENVSLWYRYM KEGAESVHTA NPDVLVILSG 240 LEFDNTLNFV VPNQIHLSFT GKLVFEQHWY GFSDGGNWES QNQNDVCGMV VGFIKNKGLF 300 LLQQGWPLFF SEFGFDMSGT HTGDNRYLTC FLSVAAEMDL DWAIWALQGS YYIREGTLAY 360 DESYGLLSWD WCTARNPSFI KRINSLQSPF QGPGLPNSQE PYNVIFHPLS GLCVVVKSSE 420 ALELGPCDES NAWNYTSTHE LVLQHTGQCL QVKSVGENAQ LGTDCSKSSS KWQLISNSGM 480 HVSTELTKNG TRVCLDATPD GIITTNPCKC LTGDPNCNPE SQWFKIILSS RHTGTSILQL 540 PSDGPWSPTS SS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00458 | RICIN | 0.002 | 405 | 523 | 130 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
| cd00161 | RICIN | 0.0002 | 402 | 526 | 137 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
| pfam00150 | Cellulase | 2.0e-11 | 70 | 347 | 288 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAD41089.2 | 0 | 1 | 552 | 1 | 550 | OSJNBb0011N17.6 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CAH66880.1 | 0 | 26 | 552 | 27 | 554 | OSIGBa0158F13.11 [Oryza sativa (indica cultivar-group)] |
| EMBL | CAH67676.1 | 0 | 30 | 552 | 33 | 553 | H0510A06.1 [Oryza sativa (indica cultivar-group)] |
| GenBank | EAY94563.1 | 0 | 1 | 552 | 1 | 552 | hypothetical protein OsI_16341 [Oryza sativa Indica Group] |
| RefSeq | NP_001053105.1 | 0 | 26 | 552 | 27 | 554 | Os04g0480900 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.000004 | 31 | 320 | 8 | 290 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.000004 | 31 | 320 | 8 | 290 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.00003 | 31 | 346 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00003 | 31 | 346 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 4dm1_C | 0.002 | 36 | 205 | 20 | 168 | A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase |
