| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os04g44840.1 |
| Family | GH3 |
| Protein Properties | Length: 771 Molecular Weight: 83652 Isoelectric Point: 6.176 |
| Chromosome | Chromosome/Scaffold: 4 Start: 26543226 End: 26546926 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 72 | 321 | 0 |
| AGAPRLGVPPFEWWSESLHGVCDNGPGVNFSSGPVRSATIFPQVILSAAAFNRSLWRAAARAIAVEARAMHNAGQAGLTFWAPNINVFRDPRWGRGQETP GEDPAVVSAYSVEYVKGFQRDYGEEGRMMLSACCKHYIAYDLEKWRGFTRYTFNAKVNAQDMEDTYQPPFKSCIQEGRASCLMCSYNQVNGVPACARKDI LQRARDEWGFQGYITSDCDAVAIIHENQTYTASDEDSIAVVLKAGMDINC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 771 Download |
| MSNVPLLLLL VVASAGAGDG AAPASNARPC ASPAASAYPF CNATLPFPAR ARALVSLLTL 60 DEKIAQLSNT AAGAPRLGVP PFEWWSESLH GVCDNGPGVN FSSGPVRSAT IFPQVILSAA 120 AFNRSLWRAA ARAIAVEARA MHNAGQAGLT FWAPNINVFR DPRWGRGQET PGEDPAVVSA 180 YSVEYVKGFQ RDYGEEGRMM LSACCKHYIA YDLEKWRGFT RYTFNAKVNA QDMEDTYQPP 240 FKSCIQEGRA SCLMCSYNQV NGVPACARKD ILQRARDEWG FQGYITSDCD AVAIIHENQT 300 YTASDEDSIA VVLKAGMDIN CGSFLIRHTK SAIEKGKVQE EDINHALFNL FSVQLRLGFF 360 DKTNENQWFT QLGPNNVCTT EHRELAAEAV RQGTVLLKND NGFLPLKRSE VGHIALIGPA 420 ANDPYILGGD YTGVPCHSTT FVKGMQAYVP KTTFAAGCKD VPCNSTDGFG EAIEAAKRAD 480 VVVLIAGLNL TEETEDHDRV SLLLPGRQMD LIHTVASVTK KPVVLVLMGG GPVDVSFAKH 540 DPRIASILWI GYPGEVGGNV LPEILFGKYN PGGKLPITWY PESFTAVPMD DMNMRADASR 600 GYPGRTYRFY TGDVVYGFGY GLSYSKYSYS ILQAPKKISL SRSSVPDLIS RKPAYTRRDG 660 VDYVQVEDIA SCEALQFPVH ISVSNDGAMD GSHAVLLFAS SKPSFPGSPI KQLVGFERVH 720 TAAGRSTDVE ITVDPCKLMS FANTEGTRVL FLGTHVLMVG DEEHELLIEA * 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 3.0e-43 | 71 | 432 | 382 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-47 | 394 | 581 | 193 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 6.0e-52 | 59 | 344 | 326 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 8.0e-60 | 152 | 767 | 674 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 28 | 770 | 750 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005773 | vacuole |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN26462.1 | 0 | 141 | 769 | 1 | 629 | unknown [Zea mays] |
| EMBL | CAJ86207.1 | 0 | 1 | 770 | 1 | 738 | B1011H02.4 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEE61389.1 | 0 | 1 | 770 | 1 | 771 | hypothetical protein OsJ_15562 [Oryza sativa Japonica Group] |
| RefSeq | NP_001053392.1 | 0 | 1 | 770 | 1 | 770 | Os04g0530700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448225.1 | 0 | 27 | 769 | 21 | 765 | hypothetical protein SORBIDRAFT_06g023450 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 110 | 766 | 91 | 728 | A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant |
| PDB | 3u48_A | 0 | 110 | 766 | 91 | 728 | A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant |
| PDB | 3u4a_B | 0 | 110 | 766 | 91 | 728 | A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant |
| PDB | 3u4a_A | 0 | 110 | 766 | 91 | 728 | A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant |
| PDB | 2x41_A | 1e-34 | 50 | 634 | 3 | 610 | A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
