y
Basic Information | |
---|---|
Species | Oryza sativa |
Cazyme ID | LOC_Os04g47400.1 |
Family | AA1 |
Protein Properties | Length: 555 Molecular Weight: 61064.8 Isoelectric Point: 9.2394 |
Chromosome | Chromosome/Scaffold: 4 Start: 28126890 End: 28130289 |
Description | SKU5 similar 5 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 48 | 504 | 0 |
QQQGILINGQFPGPEIDCQTNDNLIVNVHNRLSEPFLLSWNGLQHRKNSWQDGVSGTNCPIPPGQNFTYQMQAKDQIGSFFYFPSLAFHKAAGGFGAIRI RSRPLIPVPFDPPAGEYTMLIGDWYKTSHKALQAMLDSGKQLPSPDGILINGKGPNGASFTVEQGKTYRLRVSNVGLQSTLNLRIQDHNMTLVEVEGTHT VQNTYSSLYVHAGQSLSVLFTANRPPGVYQITVSTRFAKRALNSSAVLRYAGSSATISSPPPPAGLADDIDFSLDQARSIRTNLTASGPRPNPQGSYHYG SINVTRTIRLANSAGRVAGKQRYAVNGVSFVEADTPLKLADYYRISDVFRLGGIPDAPPAGAAAAPRSEAAVMDSDYRSFLEIVFENSEDSVQIWHLDGY SLFVVGMDRGVWSEQSRKSYNLVDAVSRCTVQVYPRAWTAVLVALDNVGMWNLRSED |
Full Sequence |
---|
Protein Sequence Length: 555 Download |
MSSRRSMGAL AAVCVCMFVF VSSARAEDPY RFFDWEVTTG NINPLGVQQQ GILINGQFPG 60 PEIDCQTNDN LIVNVHNRLS EPFLLSWNGL QHRKNSWQDG VSGTNCPIPP GQNFTYQMQA 120 KDQIGSFFYF PSLAFHKAAG GFGAIRIRSR PLIPVPFDPP AGEYTMLIGD WYKTSHKALQ 180 AMLDSGKQLP SPDGILINGK GPNGASFTVE QGKTYRLRVS NVGLQSTLNL RIQDHNMTLV 240 EVEGTHTVQN TYSSLYVHAG QSLSVLFTAN RPPGVYQITV STRFAKRALN SSAVLRYAGS 300 SATISSPPPP AGLADDIDFS LDQARSIRTN LTASGPRPNP QGSYHYGSIN VTRTIRLANS 360 AGRVAGKQRY AVNGVSFVEA DTPLKLADYY RISDVFRLGG IPDAPPAGAA AAPRSEAAVM 420 DSDYRSFLEI VFENSEDSVQ IWHLDGYSLF VVGMDRGVWS EQSRKSYNLV DAVSRCTVQV 480 YPRAWTAVLV ALDNVGMWNL RSEDWARRYQ GQQFYLRVYT PSHSFRDELP IPSNALRCGR 540 ATNASGRSRT LSRY* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 12 | 542 | 531 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 8 | 539 | 541 | + copper ion binding / oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 21 | 543 | 525 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 15 | 541 | 527 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 10 | 540 | 546 | + copper ion binding / pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005488 | binding |
GO:0005507 | copper ion binding |
GO:0005575 | cellular_component |
GO:0005576 | extracellular region |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH67167.1 | 0 | 1 | 554 | 1 | 554 | H0211B05.4 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC77800.1 | 0 | 7 | 554 | 1 | 568 | hypothetical protein OsI_16980 [Oryza sativa Indica Group] |
GenBank | EEE61490.1 | 0 | 7 | 554 | 1 | 568 | hypothetical protein OsJ_15776 [Oryza sativa Japonica Group] |
RefSeq | NP_001053555.1 | 0 | 1 | 554 | 1 | 554 | Os04g0561900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448327.1 | 0 | 10 | 540 | 5 | 559 | hypothetical protein SORBIDRAFT_06g025300 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 31 | 539 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asq_A | 0 | 31 | 539 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asp_B | 0 | 31 | 539 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asp_A | 0 | 31 | 539 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1aso_B | 0 | 31 | 539 | 4 | 539 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |