Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os04g57510.1 |
Family | GT47 |
Protein Properties | Length: 465 Molecular Weight: 52468.3 Isoelectric Point: 9.2064 |
Chromosome | Chromosome/Scaffold: 4 Start: 34209652 End: 34214800 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 45 | 389 | 0 |
LLRVYVAELPRALNHGLLDLYWSLPAADSRIPASSDPDHPPPRPPRAHSPYPDSPLIKQYSAEYWLLASLQPGSSSAPAVRVVADWRDADVVFVPFFATL SAEMELGWGAKGAFRRKEGNEDYRRQREVVDRVTAHPAWRRSGGRDHVFVLTDPVAMWHVRKEIAPAILLVVDFGGWYKLDSNSASSNVSHMIQHTQVSL LKDVIVPYTHLLPTMHLSENKDRPTLLYFKGAKHRHRGGLVREKLWDLMVNEPDVVMEEGYPNATGREQSIKGMRTSEFCLHPAGDTPTSCRLFDAVASL CIPVIVSDEIELPFEGMIDYTEFAIFVSVNNSMRPKWLTNYLRNV |
Full Sequence |
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Protein Sequence Length: 465 Download |
MARLALLAVP VALLLSLSFL LLRPASPPLP FSRQQAASGP DRRRLLRVYV AELPRALNHG 60 LLDLYWSLPA ADSRIPASSD PDHPPPRPPR AHSPYPDSPL IKQYSAEYWL LASLQPGSSS 120 APAVRVVADW RDADVVFVPF FATLSAEMEL GWGAKGAFRR KEGNEDYRRQ REVVDRVTAH 180 PAWRRSGGRD HVFVLTDPVA MWHVRKEIAP AILLVVDFGG WYKLDSNSAS SNVSHMIQHT 240 QVSLLKDVIV PYTHLLPTMH LSENKDRPTL LYFKGAKHRH RGGLVREKLW DLMVNEPDVV 300 MEEGYPNATG REQSIKGMRT SEFCLHPAGD TPTSCRLFDA VASLCIPVIV SDEIELPFEG 360 MIDYTEFAIF VSVNNSMRPK WLTNYLRNVP RQQKDEFRRN MAHVQPIFEY DSIYPGRMAS 420 AAQDGAVNHI WKKIHQKLPM IQEAVTREKR KPDGTSIPLR CHCT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-60 | 42 | 389 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005623 | cell |
GO:0008150 | biological_process |
GO:0008152 | metabolic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAE02830.1 | 0 | 1 | 464 | 1 | 464 | OSJNBa0043A12.35 [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC78225.1 | 0 | 23 | 464 | 23 | 452 | hypothetical protein OsI_17865 [Oryza sativa Indica Group] |
RefSeq | NP_001137073.1 | 0 | 23 | 464 | 24 | 458 | hypothetical protein LOC100217246 [Zea mays] |
RefSeq | XP_002448739.1 | 0 | 23 | 464 | 24 | 456 | hypothetical protein SORBIDRAFT_06g032380 [Sorghum bicolor] |
RefSeq | XP_002533317.1 | 0 | 46 | 464 | 55 | 478 | catalytic, putative [Ricinus communis] |