| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os04g58555.1 |
| Family | CBM43 |
| Protein Properties | Length: 210 Molecular Weight: 22514.2 Isoelectric Point: 6.0997 |
| Chromosome | Chromosome/Scaffold: 4 Start: 34814248 End: 34815214 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 124 | 207 | 7e-32 |
| WCVPKPAADEVALQVNIDFVCGQGGIDCGAIRAGGSCYDPNNVQAHAAFAMNLYFQSNGQHEFDCDFGQTGVITTVDPSYKSCK | |||
| Full Sequence |
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| Protein Sequence Length: 210 Download |
| MRRLGFGDVD VVVSGTGCRP PASTXGGRAD LRQGLQQERH PPPRLPRGTP LMPNRTFELS 60 IFSLFDENLK PGPVSERNFG LYHADMTPVY DAGILTAPQE IVGTKVTPAP APALAPAEDG 120 RRRWCVPKPA ADEVALQVNI DFVCGQGGID CGAIRAGGSC YDPNNVQAHA AFAMNLYFQS 180 NGQHEFDCDF GQTGVITTVD PSYKSCKFT* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-14 | 1 | 91 | 95 | + Glycosyl hydrolases family 17. | ||
| pfam07983 | X8 | 1.0e-21 | 123 | 195 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 9.0e-41 | 124 | 208 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH92875.1 | 0 | 52 | 209 | 1 | 158 | Os04g0681950 [Oryza sativa Japonica Group] |
| EMBL | CAJ86292.1 | 0 | 1 | 209 | 1006 | 1216 | H0124B04.9 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEC78268.1 | 0 | 1 | 209 | 702 | 912 | hypothetical protein OsI_17962 [Oryza sativa Indica Group] |
| GenBank | EEE61922.1 | 0 | 48 | 209 | 731 | 892 | hypothetical protein OsJ_16662 [Oryza sativa Japonica Group] |
| RefSeq | XP_002448791.1 | 0 | 1 | 208 | 254 | 463 | hypothetical protein SORBIDRAFT_06g033250 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 1e-28 | 106 | 208 | 1 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 4gzj_A | 0.00000007 | 2 | 90 | 223 | 310 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 4gzi_A | 0.00000007 | 2 | 90 | 223 | 310 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
| PDB | 3ur8_B | 0.0000001 | 2 | 90 | 223 | 310 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
| PDB | 3ur8_A | 0.0000001 | 2 | 90 | 223 | 310 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CI276177 | 144 | 67 | 210 | 0 |
| CA103690 | 165 | 48 | 210 | 0 |
| DR796896 | 143 | 70 | 210 | 0 |
| CA782147 | 213 | 1 | 208 | 0 |
| DT764089 | 210 | 1 | 208 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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