| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os05g17604.6 |
| Family | CBM57 |
| Protein Properties | Length: 622 Molecular Weight: 68710.9 Isoelectric Point: 9.4873 |
| Chromosome | Chromosome/Scaffold: 5 Start: 10112481 End: 10120793 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 335 | 495 | 2.6e-28 |
| FAVDCGSNASIRGSDDTIYEADPTNLGAATYYVTGQTRWGVSSVGNAIDAKNIIYSSQPFQNVVDSELFETARMSSSSLRYYGLGLENGNYTVLLQFAEL AFPDSQTWLSLGRRVFDIYIQGALKQKDFDIRKTAGGKSFTVVNRSFMVTVSKNFLEIHLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 622 Download |
| MRVGISEFPC RISGRPRQKW RRMERFVDDL LRSLKKNATL KIESIYRICN ACVNPKRIPD 60 LIEKVLATAI HEKLIEITSS LEIKTNAAQL KIPHVGRSER REAVGWNLFR NYLTGPIPSF 120 IGKFTSMQYL SLSFNPLSGL LPKELGNLTN LLSLGISSDN FTGSLPEELG NLTKLQQLSA 180 SDNVFKGKIP AYLGTMTNLE DIWIGDIING VSPLAFISNM ASLSTLILRN CKISSDLGAV 240 EFSMFKQLKL LFLGNNSLTG KLPDGISSSL KVIDFSYNQL TGSIPSWARQ NNLQLNLVAN 300 NFLLDTTSES TLPWGINCLQ QDTPCFRGSP EYYSFAVDCG SNASIRGSDD TIYEADPTNL 360 GAATYYVTGQ TRWGVSSVGN AIDAKNIIYS SQPFQNVVDS ELFETARMSS SSLRYYGLGL 420 ENGNYTVLLQ FAELAFPDSQ TWLSLGRRVF DIYIQGALKQ KDFDIRKTAG GKSFTVVNRS 480 FMVTVSKNFL EIHLFWAGKG TVDIPTKDNY YGPMISALSV TPNFTPTVRN GIPKRKSKAG 540 AISGILIGAI VLVLAALFGV FTLVKKRRAL AQQKEELYNL VGRPDVFSYA ELKLATDNFS 600 SQNILGEGGF GPVYKVLYFH N* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 3.0e-19 | 107 | 286 | 187 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 9.0e-21 | 113 | 286 | 178 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 5.0e-21 | 107 | 285 | 182 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-22 | 57 | 285 | 239 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 2.0e-52 | 333 | 518 | 187 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000166 | nucleotide binding |
| GO:0005515 | protein binding |
| GO:0005575 | cellular_component |
| GO:0005886 | plasma membrane |
| GO:0006464 | cellular protein modification process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT85158.1 | 0 | 61 | 615 | 17 | 585 | hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | EEC78867.1 | 0 | 87 | 615 | 2 | 532 | hypothetical protein OsI_19224 [Oryza sativa Indica Group] |
| GenBank | EEE63030.1 | 0 | 40 | 615 | 574 | 1140 | hypothetical protein OsJ_17838 [Oryza sativa Japonica Group] |
| GenBank | EEE63030.1 | 0 | 56 | 616 | 12 | 574 | hypothetical protein OsJ_17838 [Oryza sativa Japonica Group] |
| RefSeq | NP_001052392.1 | 0 | 107 | 615 | 115 | 691 | Os04g0291900 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 0.000000000000002 | 64 | 301 | 238 | 521 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3rj0_A | 0.00000000001 | 81 | 285 | 396 | 646 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3rj0_A | 0.000000002 | 110 | 301 | 207 | 401 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3rj0_A | 0.000000007 | 57 | 286 | 343 | 553 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3rj0_A | 0.000000007 | 126 | 202 | 630 | 706 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
