| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os05g25560.1 |
| Family | GH10 |
| Protein Properties | Length: 582 Molecular Weight: 62704.6 Isoelectric Point: 6.173 |
| Chromosome | Chromosome/Scaffold: 5 Start: 14854444 End: 14856294 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 234 | 523 | 0 |
| VVQMDNVFPLGTCINGSVIQDPNFVDFFTNNFDWAVFENELKWYWTEAQRGLLNYRDADALLDFCDRHGKPARGHCIFWAVDGSVQQWIKDLGRDDLASA VRGRLTGLLSRYAGRFPHYDVNNEMLHGRFYRDRLGDDAAALMFREAARLDPAARLFVNDYNVECANDPNATPEKYIELIDALRRGGAAVGGVGIQGHVS NPSGEVICGALDKLAASTGLPIWITELDVSEPDVSLRADDLEVVLREAYAHPAVAGVVLWGFMQGRMWRQDASLVDADGTVNEAGQRLVN | |||
| Full Sequence |
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| Protein Sequence Length: 582 Download |
| MACTREVAFG VNLIGNNGAA PADEASSLAG WAPVGSRTTL SAHVEKDDPP AAMLPAVDDG 60 GREHRPSGSR YVLAARRDGE EDGLRHPVPA GALVPRVTYR VAGWVAVQSG GGEHAGGESH 120 VVRVSLHVDD GGECRVLGCG AVCAGVAGGW VEINGAFRLK ATPRGATAVH VHGAPAGVDV 180 KLMDLRVFAA DRKARFRHLK EKTDKVRKRD VVLKFSGGAG VEATASIPGA AVRVVQMDNV 240 FPLGTCINGS VIQDPNFVDF FTNNFDWAVF ENELKWYWTE AQRGLLNYRD ADALLDFCDR 300 HGKPARGHCI FWAVDGSVQQ WIKDLGRDDL ASAVRGRLTG LLSRYAGRFP HYDVNNEMLH 360 GRFYRDRLGD DAAALMFREA ARLDPAARLF VNDYNVECAN DPNATPEKYI ELIDALRRGG 420 AAVGGVGIQG HVSNPSGEVI CGALDKLAAS TGLPIWITEL DVSEPDVSLR ADDLEVVLRE 480 AYAHPAVAGV VLWGFMQGRM WRQDASLVDA DGTVNEAGQR LVNLRREWTS DARGTIDGDG 540 HFTFRGYHGT YVVQVTTATG KILKTFTVDK GDTSLVLDME I* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 5.0e-33 | 212 | 503 | 312 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 6.0e-64 | 239 | 523 | 306 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-70 | 274 | 521 | 269 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005618 | cell wall |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY72426.1 | 0 | 1 | 581 | 1 | 557 | hypothetical protein OsI_00280 [Oryza sativa Indica Group] |
| GenBank | EAY97420.1 | 0 | 1 | 581 | 1 | 569 | hypothetical protein OsI_19350 [Oryza sativa Indica Group] |
| GenBank | EAY97529.1 | 0 | 1 | 581 | 1 | 581 | hypothetical protein OsI_19457 [Oryza sativa Indica Group] |
| RefSeq | NP_001041947.1 | 0 | 1 | 581 | 1 | 557 | Os01g0134900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001055187.1 | 0 | 1 | 581 | 1 | 581 | Os05g0319900 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xyz_B | 3e-29 | 226 | 501 | 22 | 313 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1xyz_A | 3e-29 | 226 | 501 | 22 | 313 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1x_A | 3e-29 | 243 | 515 | 27 | 289 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| PDB | 1i1w_A | 3e-29 | 243 | 515 | 27 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1tux_A | 9e-29 | 271 | 515 | 46 | 289 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CB647597 | 274 | 122 | 395 | 0 |
| FL860597 | 241 | 294 | 532 | 0 |
| GO850973 | 334 | 157 | 490 | 0 |
| HO149443 | 229 | 230 | 457 | 0 |
| FL874412 | 263 | 224 | 486 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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