| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os05g32530.1 |
| Family | GH2 |
| Protein Properties | Length: 985 Molecular Weight: 110605 Isoelectric Point: 6.5628 |
| Chromosome | Chromosome/Scaffold: 5 Start: 19010877 End: 19019771 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 48 | 786 | 0 |
| DPEPTAPWMHAAVPGTVLGTLLKNKLIPDPFYGLNNESIIDIAKSGRGHYTFWFFTTFQCAPAGHQHVSLNFRGINYSAEVYLNGHKEVLPKGMFRRHTL DITDVLRPDGKNLLAVLVHPPVHPGAIPPQGGQGGDHEIGKDVATQYVEGWDWMCPIRDRNTGIWDEVSISVTGPVRIMDPHLVSTFYDDFKRSYLHCTL QLENRSSWLSDCKLKIQVSTELEGNICLVEHLQSYEISVPPNSVLEYTIPPLFFYKPNLWWPNGMGKQSLYNVEIGVDANGFGESDSSNHHFGFRKIEST IDGSTGGRIFKVNGEPVFIRGGNWILSDGLLRLTRKRYMTDIKFHADMNFNMLRCWGGGLAERPDFYHFCDIYGLMVWQEFWITGDVDGRGIPISNPNGP LDHDLFLLCARDTVKLLRNHASLALWVGGNEQVPPVDINKALKNDLKLHPMFVSNHTTKSPGKDISEDPTDPSKYLDGTRVYVQGSMWDGFANGKGDFTD GPYEIQYPESFFKDSFYKYGFNPEVGSVGVPVAATIRATMPSEGWSIPIFKKRIDGYINEVPNPIWDYHKYIPYSKPGKVHDQIELYGHPSDLDDFCEKA QLVNYVQYRALLEGWTSFMWTKFTGVLIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLDSYFIEVVNTTADELRDVAVEISAWDLDGAS PYYRVTEKIAVPPKKVQQVTEMSYPKTKNPKPVYFLLLK | |||
| Full Sequence |
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| Protein Sequence Length: 985 Download |
| MAAAAAAAAA AAAEVGKRVL DTGWLAARST EVALTGEQLT TTDPPPADPE PTAPWMHAAV 60 PGTVLGTLLK NKLIPDPFYG LNNESIIDIA KSGRGHYTFW FFTTFQCAPA GHQHVSLNFR 120 GINYSAEVYL NGHKEVLPKG MFRRHTLDIT DVLRPDGKNL LAVLVHPPVH PGAIPPQGGQ 180 GGDHEIGKDV ATQYVEGWDW MCPIRDRNTG IWDEVSISVT GPVRIMDPHL VSTFYDDFKR 240 SYLHCTLQLE NRSSWLSDCK LKIQVSTELE GNICLVEHLQ SYEISVPPNS VLEYTIPPLF 300 FYKPNLWWPN GMGKQSLYNV EIGVDANGFG ESDSSNHHFG FRKIESTIDG STGGRIFKVN 360 GEPVFIRGGN WILSDGLLRL TRKRYMTDIK FHADMNFNML RCWGGGLAER PDFYHFCDIY 420 GLMVWQEFWI TGDVDGRGIP ISNPNGPLDH DLFLLCARDT VKLLRNHASL ALWVGGNEQV 480 PPVDINKALK NDLKLHPMFV SNHTTKSPGK DISEDPTDPS KYLDGTRVYV QGSMWDGFAN 540 GKGDFTDGPY EIQYPESFFK DSFYKYGFNP EVGSVGVPVA ATIRATMPSE GWSIPIFKKR 600 IDGYINEVPN PIWDYHKYIP YSKPGKVHDQ IELYGHPSDL DDFCEKAQLV NYVQYRALLE 660 GWTSFMWTKF TGVLIWKTQN PWTGLRGQFY DHLLDQTAGF YGCRCAAEPI HVQLNLDSYF 720 IEVVNTTADE LRDVAVEISA WDLDGASPYY RVTEKIAVPP KKVQQVTEMS YPKTKNPKPV 780 YFLLLKLFKL SDNQVLSRNF YWLHLPGKDY KLLEQYRQKQ IPLKINSKIS ISGSGYKVRM 840 SIENRSKKPE NANVSTMNLA DANGSDRTGE EAIQDGHSSG LWGKIRRGLI ITRSDDNVRT 900 VEVKGADSGV SFFLHFSVHT SEPSSSQDVY KDTRILPVHY SDNYFSLVPG EKMAIDISFE 960 APQGSTPRVI LKGWNYHLDH AVTL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09525 | lacZ | 0.0001 | 103 | 478 | 426 | + beta-D-galactosidase; Reviewed | ||
| pfam02837 | Glyco_hydro_2_N | 9.0e-8 | 98 | 166 | 70 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| PRK10340 | ebgA | 7.0e-11 | 113 | 478 | 383 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 6.0e-11 | 223 | 342 | 120 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 7.0e-35 | 59 | 491 | 441 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005773 | vacuole |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAV31255.1 | 0 | 16 | 790 | 16 | 790 | putative glycosyl hydrolase [Oryza sativa Japonica Group] |
| GenBank | EEC79162.1 | 0 | 15 | 984 | 16 | 985 | hypothetical protein OsI_19836 [Oryza sativa Indica Group] |
| RefSeq | NP_001055444.1 | 0 | 16 | 984 | 16 | 984 | Os05g0391500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002319539.1 | 0 | 13 | 982 | 2 | 972 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002439742.1 | 0 | 12 | 984 | 2 | 978 | hypothetical protein SORBIDRAFT_09g019350 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 1 | 803 | 20 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 1 | 803 | 20 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 1 | 803 | 20 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO871600 | 333 | 314 | 646 | 0 |
| GO847639 | 346 | 531 | 873 | 0 |
| ES793920 | 368 | 387 | 748 | 0 |
| CB629894 | 276 | 309 | 584 | 0 |
| CK208936 | 332 | 455 | 786 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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