| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os05g37700.1 |
| Family | GH3 |
| Protein Properties | Length: 607 Molecular Weight: 65848.1 Isoelectric Point: 5.289 |
| Chromosome | Chromosome/Scaffold: 5 Start: 22068489 End: 22072900 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 84 | 319 | 0 |
| LSSRLAVPILYGTDAVHGHNNVYGATVFPHNVGLGATRDAELARKIGEATALEVRATGIHWTFAPCVAVCRDPRWGRCYECYSEDTEVVRSLTTIVSGLQ GQPPADHPHGYPFLSSPRVNVLACAKHFVGDGGTDKGINEGNTICSLEDLEGIHIRPYPDCISQGVATVMASYTQWNGEPLHASRYLLTDVLKGKLGFKG FVVSDWEGIDRLCEPRGSDYRYCIAQSVNAGMDMIM | |||
| Full Sequence |
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| Protein Sequence Length: 607 Download |
| MAAAALYKDA AAPVEARVRD LLGRMTLREK AAQMAQIERT VASPRAIAEL GAGSVLNGGG 60 SAPLPRASAA DWARMVDGMQ RHALSSRLAV PILYGTDAVH GHNNVYGATV FPHNVGLGAT 120 RDAELARKIG EATALEVRAT GIHWTFAPCV AVCRDPRWGR CYECYSEDTE VVRSLTTIVS 180 GLQGQPPADH PHGYPFLSSP RVNVLACAKH FVGDGGTDKG INEGNTICSL EDLEGIHIRP 240 YPDCISQGVA TVMASYTQWN GEPLHASRYL LTDVLKGKLG FKGFVVSDWE GIDRLCEPRG 300 SDYRYCIAQS VNAGMDMIMI PFRFEKFLED LVFLVEAGEI PMSRIDDAVE RILRVKFISG 360 VFEHPFSDPS LADIIGCKEH RLLAREAVRK SLVLLKNGKN QKEPFLPLAK NVKRILVAGT 420 HSDNIGYQCG GWTIAWNGDS GRITIGTTIL EAIKESVGAE TEVVYEECPT EATVETGEFS 480 YAVVVVGEVP YAEWLGDRTD LSIPFNGSDL ISRIASKVPT LVVVISGRPL VVEPQVLDKV 540 DALVAAWLPG SEGMGVTDCL FGDHDFLGTL PVTWFRSTDQ LPINARDASD DPLFPFGYGL 600 KMFRGD* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 4.0e-38 | 13 | 600 | 655 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 8.0e-53 | 392 | 600 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 1.0e-82 | 15 | 600 | 657 | + beta-D-glucoside glucohydrolase; Provisional | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-85 | 26 | 355 | 334 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| COG1472 | BglX | 9.0e-91 | 25 | 457 | 442 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005829 | cytosol |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79317.1 | 0 | 1 | 606 | 1 | 606 | hypothetical protein OsI_20160 [Oryza sativa Indica Group] |
| GenBank | EEE63918.1 | 0 | 1 | 606 | 1 | 606 | hypothetical protein OsJ_18743 [Oryza sativa Japonica Group] |
| RefSeq | NP_001145784.1 | 0 | 3 | 606 | 9 | 615 | hypothetical protein LOC100279291 [Zea mays] |
| RefSeq | XP_002279757.1 | 0 | 6 | 600 | 116 | 711 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313393.1 | 0 | 2 | 606 | 3 | 600 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 6 | 600 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1iex_A | 0 | 6 | 600 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1iew_A | 0 | 6 | 600 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1iev_A | 0 | 6 | 600 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1ieq_A | 0 | 6 | 600 | 4 | 597 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO800387 | 338 | 170 | 507 | 0 |
| GO876678 | 318 | 233 | 550 | 0 |
| HO784016 | 429 | 53 | 480 | 0 |
| GO889604 | 283 | 309 | 591 | 0 |
| DY265467 | 329 | 133 | 461 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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