| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os05g43690.1 |
| Family | CBM43 |
| Protein Properties | Length: 229 Molecular Weight: 21760.3 Isoelectric Point: 5.5351 |
| Chromosome | Chromosome/Scaffold: 5 Start: 25399241 End: 25401867 |
| Description | plasmodesmata callose-binding protein 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 22 | 103 | 1.1e-30 |
| CVCKPDQSPAAMQKAIDYACWRGADCTQIMQSGACYQPSTIVAHCSYATNSYFQKNSPIGATCDFGGVATLTNTDPSSGTCK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 229 Download |
| MAIPLLLLLL LAMSTGSDGA FCVCKPDQSP AAMQKAIDYA CWRGADCTQI MQSGACYQPS 60 TIVAHCSYAT NSYFQKNSPI GATCDFGGVA TLTNTDPSSG TCKYPATASG VGTGMGTGTS 120 TGTGTGVGTG GTGTGGAGVG AGTGTGVGTG TGTGAGMGTG AGAGTGITTP GSTTGTQGGA 180 LSPPFGGAYG PSAGAMNPDY NEAAPARSQL AAATSVLLAA APFLFHLI* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-18 | 22 | 91 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-35 | 21 | 104 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005575 | cellular_component |
| GO:0008150 | biological_process |
| GO:0016020 | membrane |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY98672.1 | 0 | 1 | 228 | 1 | 233 | hypothetical protein OsI_20600 [Oryza sativa Indica Group] |
| RefSeq | NP_001044338.1 | 1.99993e-41 | 16 | 203 | 19 | 182 | Os01g0763900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001056023.1 | 0 | 1 | 228 | 1 | 228 | Os05g0512600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151015.1 | 9.94922e-44 | 5 | 125 | 5 | 125 | glucan endo-1,3-beta-glucosidase 1 [Zea mays] |
| RefSeq | XP_002458540.1 | 5e-40 | 16 | 125 | 17 | 125 | hypothetical protein SORBIDRAFT_03g035410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-18 | 19 | 106 | 11 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
