| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os05g45720.2 |
| Family | GT5 |
| Protein Properties | Length: 874 Molecular Weight: 99662.1 Isoelectric Point: 6.0794 |
| Chromosome | Chromosome/Scaffold: 5 Start: 26485812 End: 26494112 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 423 | 721 | 0 |
| HIIHIAAEMAPVAKVGGLADVISGLGKALQKKGHLVEIILPKYDCMQNDQVNNLKVLDVVVQSYFEGNLFNNKIWTGTVEGLPVYFIEPQHPAKFFWRAQ YYGEHDDFKRFAYFSRAALELLYQSQKKIDIIHCHDWQTAFVAPLYWEAYANLGFNSARICFTCHNFEYQGAAPAQDLACCGLDVQQLDREDRMRDNSHG RINVVKGAIVYSNIVTTVSPTYALEVRSEGGRGLQDSLKLHSRKFVGILNGIDTDTWNPSTDRHLKVQYNANDLQGKAANKAALRKQLNLSSTNASQPL | |||
| GT5 | 723 | 863 | 0 |
| EFEGIADHFQNNNNIRLLLKYDDSLSHWIYAASDMFIVPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPKELRNGFTFVHPDEKALSGA MERAFNYYNRKPEVWKQLVQKDMRIDFSWASSASQYEDIYQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 874 Download |
| MACLAAGAEA APLLFRRRLA PSPVAARRRL LVSCRARRRG LRTAAELPRK STSNDKHHNR 60 VNMQRDEASV SSDKERQEKY GDENGISNLQ LEDLIQMIQN TEKNIMLLNQ ARLQALEHVE 120 TVLKEKEDLQ RKLKILETRL SETDARLKLS AEGQFGTEIN DSLPVLELDD IKEENMLLKD 180 DIQFLKTMLI EVAETENSIF TLEKERALLD ASLRELESRF IDAQADMLKS DPRQYDAWWE 240 KVENLGDLLE TATNKVENAA MVLGRNHDLE DKVDKLEASL AEANISKFSC YFVDLLQEKI 300 KSVEERFQVC NHEMHSQIEL YENSIAEFHD ILSKLVEETE KRSLEHSASS MPSELWSRIS 360 LLIDGWLLEK RISYNDANTL REMVRKRDSC LREAYLSCRG MKDREIVDNF LKITLPGTSS 420 GLHIIHIAAE MAPVAKVGGL ADVISGLGKA LQKKGHLVEI ILPKYDCMQN DQVNNLKVLD 480 VVVQSYFEGN LFNNKIWTGT VEGLPVYFIE PQHPAKFFWR AQYYGEHDDF KRFAYFSRAA 540 LELLYQSQKK IDIIHCHDWQ TAFVAPLYWE AYANLGFNSA RICFTCHNFE YQGAAPAQDL 600 ACCGLDVQQL DREDRMRDNS HGRINVVKGA IVYSNIVTTV SPTYALEVRS EGGRGLQDSL 660 KLHSRKFVGI LNGIDTDTWN PSTDRHLKVQ YNANDLQGKA ANKAALRKQL NLSSTNASQP 720 LREFEGIADH FQNNNNIRLL LKYDDSLSHW IYAASDMFIV PSMFEPCGLT QMIAMRYGSV 780 PIVRKTGGLN DSVFDFDDET IPKELRNGFT FVHPDEKALS GAMERAFNYY NRKPEVWKQL 840 VQKDMRIDFS WASSASQYED IYQRAVARAR AAA* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0297 | GlgA | 9.0e-125 | 424 | 863 | 490 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-174 | 423 | 863 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PRK00654 | glgA | 4.0e-175 | 422 | 863 | 484 | + glycogen synthase; Provisional | ||
| PLN02939 | PLN02939 | 0 | 41 | 863 | 886 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 0 | 422 | 863 | 488 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0009536 | plastid |
| GO:0009987 | cellular process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM49813.1 | 0 | 12 | 863 | 12 | 909 | putative soluble starch synthase IV-2 [Oryza sativa Indica Group] |
| GenBank | ABD64538.1 | 0 | 1 | 864 | 1 | 905 | starch synthase IV [Triticum aestivum] |
| GenBank | ACY56261.1 | 0 | 12 | 870 | 12 | 916 | soluble starch synthase IV-2 [Oryza sativa Indica Group] |
| GenBank | EEE64478.1 | 0 | 12 | 860 | 12 | 902 | hypothetical protein OsJ_19328 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056142.1 | 0 | 12 | 863 | 12 | 905 | Os05g0533600 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 422 | 864 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 422 | 864 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 422 | 864 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 422 | 864 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 422 | 864 | 1 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CB660919 | 282 | 483 | 764 | 0 |
| GO851132 | 331 | 497 | 785 | 0 |
| CB622719 | 296 | 501 | 754 | 0 |
| JG956717 | 266 | 452 | 717 | 0 |
| JG927258 | 263 | 459 | 721 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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