| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os05g46200.1 |
| Family | GH35 |
| Protein Properties | Length: 674 Molecular Weight: 75674.4 Isoelectric Point: 5.8438 |
| Chromosome | Chromosome/Scaffold: 5 Start: 26794369 End: 26801505 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 41 | 365 | 0 |
| FWKDGAPFQIVGGDVHYFRIVPEYWKDRLLRAKALGLNTIQTYVPWNLHEPKPLSWEFKGFTDIESYLRLAHELDMLVMLRVGPYICGEWDLGGFPPWLL TIEPTIELRSSDSTYLSLVDRWWGVLLPKIAPLLYSNGGPIIMVQIENEFGSFGDDKNYLHYLVEVARRYLGNDIMLYTTDGGAIGNLKNGTILQDDVFA AVDFDTGSNPWPIFQLQKEYNLPGKSAPLSSEFYTGWLTHWGERIATTDASSTAKALKRILCRNGSAVLYMAHGGTNFGFYNGANTGQNESDYKADLTSY DYDAPIREYGDVHNAKYKALRRVIH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 674 Download |
| MGPSRSFQNL LLLLLPLALA LCSAAASGEA SRRFWVENDT FWKDGAPFQI VGGDVHYFRI 60 VPEYWKDRLL RAKALGLNTI QTYVPWNLHE PKPLSWEFKG FTDIESYLRL AHELDMLVML 120 RVGPYICGEW DLGGFPPWLL TIEPTIELRS SDSTYLSLVD RWWGVLLPKI APLLYSNGGP 180 IIMVQIENEF GSFGDDKNYL HYLVEVARRY LGNDIMLYTT DGGAIGNLKN GTILQDDVFA 240 AVDFDTGSNP WPIFQLQKEY NLPGKSAPLS SEFYTGWLTH WGERIATTDA SSTAKALKRI 300 LCRNGSAVLY MAHGGTNFGF YNGANTGQNE SDYKADLTSY DYDAPIREYG DVHNAKYKAL 360 RRVIHECTGI PLLQLPSKIE RASYGLVEVQ KVASLFDVIH NISDALKVAF SEQPLSMELM 420 GQMFGFLLYT SEYQEKHSSS ILSIPKVHDR AQVFVSCSHG DVRKPRYVGI VERWSSKTLQ 480 IPSLSCSSNV SLYILVENMG RVNYGPYIFD QKGILSSVEI DGIILRHWKM HPVSLNAVGN 540 LSKLQLIMQM TDAEASKVSI YGDSENKLQD VSLYLNEGIS EEPAFYEGHF HIDSESEKKD 600 TFISFRGWNK GVAFVNNFNI GRFWPAIGPQ CALYVPAPIL KPGDNVIVIF ELHSPNPELT 660 IKLVKDPDFT CGQ* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 5.0e-5 | 63 | 191 | 146 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam13364 | BetaGal_dom4_5 | 3.0e-6 | 563 | 649 | 90 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 4.0e-30 | 39 | 651 | 657 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 9.0e-42 | 50 | 361 | 324 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-145 | 40 | 366 | 328 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005488 | binding |
| GO:0005623 | cell |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAV59405.1 | 0 | 1 | 673 | 1 | 661 | putative beta-galactosidase [Oryza sativa Japonica Group] |
| GenBank | ACR37865.1 | 0 | 23 | 672 | 21 | 669 | unknown [Zea mays] |
| RefSeq | NP_001056172.1 | 0 | 1 | 673 | 1 | 673 | Os05g0539400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002327549.1 | 0 | 32 | 672 | 1 | 634 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002441448.1 | 0 | 23 | 672 | 21 | 605 | hypothetical protein SORBIDRAFT_09g026870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 39 | 667 | 16 | 619 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3thd_C | 0 | 39 | 667 | 16 | 619 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3thd_B | 0 | 39 | 667 | 16 | 619 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3thd_A | 0 | 39 | 667 | 16 | 619 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3thc_D | 0 | 39 | 667 | 16 | 619 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
