| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os05g46200.3 |
| Family | GH35 |
| Protein Properties | Length: 559 Molecular Weight: 62456.2 Isoelectric Point: 5.5985 |
| Chromosome | Chromosome/Scaffold: 5 Start: 26794369 End: 26801505 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 1 | 250 | 0 |
| MLVMLRVGPYICGEWDLGGFPPWLLTIEPTIELRSSDSTYLSLVDRWWGVLLPKIAPLLYSNGGPIIMVQIENEFGSFGDDKNYLHYLVEVARRYLGNDI MLYTTDGGAIGNLKNGTILQDDVFAAVDFDTGSNPWPIFQLQKEYNLPGKSAPLSSEFYTGWLTHWGERIATTDASSTAKALKRILCRNGSAVLYMAHGG TNFGFYNGANTGQNESDYKADLTSYDYDAPIREYGDVHNAKYKALRRVIH | |||
| Full Sequence |
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| Protein Sequence Length: 559 Download |
| MLVMLRVGPY ICGEWDLGGF PPWLLTIEPT IELRSSDSTY LSLVDRWWGV LLPKIAPLLY 60 SNGGPIIMVQ IENEFGSFGD DKNYLHYLVE VARRYLGNDI MLYTTDGGAI GNLKNGTILQ 120 DDVFAAVDFD TGSNPWPIFQ LQKEYNLPGK SAPLSSEFYT GWLTHWGERI ATTDASSTAK 180 ALKRILCRNG SAVLYMAHGG TNFGFYNGAN TGQNESDYKA DLTSYDYDAP IREYGDVHNA 240 KYKALRRVIH ECTGIPLLQL PSKIERASYG LVEVQKVASL FDVIHNISDA LKVAFSEQPL 300 SMELMGQMFG FLLYTSEYQE KHSSSILSIP KVHDRAQVFV SCSHGDVRKP RYVGIVERWS 360 SKTLQIPSLS CSSNVSLYIL VENMGRVNYG PYIFDQKGIL SSVEIDGIIL RHWKMHPVSL 420 NAVGNLSKLQ LIMQMTDAEA SKVSIYGDSE NKLQDVSLYL NEGISEEPAF YEGHFHIDSE 480 SEKKDTFISF RGWNKGVAFV NNFNIGRFWP AIGPQCALYV PAPILKPGDN VIVIFELHSP 540 NPELTIKLVK DPDFTCGQ* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 1.0e-6 | 448 | 534 | 90 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 3.0e-12 | 3 | 536 | 577 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 3.0e-24 | 1 | 246 | 258 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-101 | 1 | 251 | 252 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005739 | mitochondrion |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAV59405.1 | 0 | 1 | 558 | 116 | 661 | putative beta-galactosidase [Oryza sativa Japonica Group] |
| GenBank | ACR37865.1 | 0 | 1 | 557 | 114 | 669 | unknown [Zea mays] |
| RefSeq | NP_001056172.1 | 0 | 1 | 558 | 116 | 673 | Os05g0539400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002327549.1 | 0 | 1 | 557 | 91 | 634 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002441448.1 | 0 | 1 | 557 | 114 | 605 | hypothetical protein SORBIDRAFT_09g026870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 1 | 552 | 93 | 619 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_C | 0 | 1 | 552 | 93 | 619 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_B | 0 | 1 | 552 | 93 | 619 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_A | 0 | 1 | 552 | 93 | 619 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thc_D | 0 | 1 | 552 | 93 | 619 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CB630883 | 267 | 88 | 354 | 0 |
| CB670620 | 262 | 70 | 331 | 0 |
| CB645447 | 226 | 17 | 242 | 0 |
| GT861302 | 241 | 44 | 284 | 0 |
| FL916531 | 242 | 61 | 302 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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