| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os05g48520.1 |
| Family | AA5 |
| Protein Properties | Length: 623 Molecular Weight: 67528.8 Isoelectric Point: 7.0431 |
| Chromosome | Chromosome/Scaffold: 5 Start: 27807084 End: 27809817 |
| Description | glyoxal oxidase-related protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA5 | 94 | 622 | 0 |
| VDDSAGHAGSWTIVSENSGVSAMHLAVMRHGKAIMFDTSTTGRSLMRLPMNNCRADPRAKREGTMDCWAHAVEFDYSTGALRSLKTATDTWCSSGAFDAD GNLIQTGGYFEGDKAVRRLDACDTCDWREYPNSFAEGRWYATQQVLPDGRFIVFGGRRAFSYEFVPQPGMTNGQSIKFPLLRETTDDVENNLYPFVNLLP DGNLFVFANDRSVVFDHRTGKVVRELPKLAGGGRNHPASAMSAMLPLDLRNLTRGADPEPEVIVCGGALKTAFRLGENNTYQPTLRDCARINLGKIDAVW AVEAMPVGRVMGDLLVLPTGDLLMLNGAAKGSSGWGFARQPILSPILYSPRHPEGSRFRPLAASTVARMYHSTSAVLPDATVLVAGGNTNAAYNFSGVDF PTEVRVERFAPPYLSRELTGNRAVIDVASVPAGGMRYGTKFTFRFHTPVAAVEWGDVRVTMYAPPFTTHGYSMNQRLLVLPVAGFSAQGQMYELTVDTPR KPELAPPGYYLVYVVSKDVPSEAAWVKIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 623 Download |
| MGSSSLPRAA VLAVALLLLL ADSGEAFFDL FSIFRPRSDS DYFPFDGSPG QAKRKPKIEQ 60 EEDGAAPATA TGLTKVPPLG APSKAALDTI VLPVDDSAGH AGSWTIVSEN SGVSAMHLAV 120 MRHGKAIMFD TSTTGRSLMR LPMNNCRADP RAKREGTMDC WAHAVEFDYS TGALRSLKTA 180 TDTWCSSGAF DADGNLIQTG GYFEGDKAVR RLDACDTCDW REYPNSFAEG RWYATQQVLP 240 DGRFIVFGGR RAFSYEFVPQ PGMTNGQSIK FPLLRETTDD VENNLYPFVN LLPDGNLFVF 300 ANDRSVVFDH RTGKVVRELP KLAGGGRNHP ASAMSAMLPL DLRNLTRGAD PEPEVIVCGG 360 ALKTAFRLGE NNTYQPTLRD CARINLGKID AVWAVEAMPV GRVMGDLLVL PTGDLLMLNG 420 AAKGSSGWGF ARQPILSPIL YSPRHPEGSR FRPLAASTVA RMYHSTSAVL PDATVLVAGG 480 NTNAAYNFSG VDFPTEVRVE RFAPPYLSRE LTGNRAVIDV ASVPAGGMRY GTKFTFRFHT 540 PVAAVEWGDV RVTMYAPPFT THGYSMNQRL LVLPVAGFSA QGQMYELTVD TPRKPELAPP 600 GYYLVYVVSK DVPSEAAWVK IQ* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09118 | DUF1929 | 9.0e-26 | 515 | 621 | 108 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
| cd02851 | E_set_GO_C | 4.0e-27 | 513 | 621 | 110 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
| pfam07250 | Glyoxal_oxid_N | 3.0e-120 | 116 | 360 | 248 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0008150 | biological_process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY98991.1 | 0 | 1 | 622 | 1 | 621 | hypothetical protein OsI_20949 [Oryza sativa Indica Group] |
| RefSeq | NP_001043851.1 | 0 | 29 | 622 | 26 | 623 | Os01g0677000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001056298.1 | 0 | 1 | 622 | 1 | 622 | Os05g0559000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001148082.1 | 0 | 5 | 622 | 3 | 619 | glyoxal oxidase [Zea mays] |
| RefSeq | XP_002440240.1 | 0 | 5 | 621 | 3 | 619 | hypothetical protein SORBIDRAFT_09g028310 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2eic_A | 0.000000002 | 166 | 621 | 206 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
| PDB | 2eib_A | 0.000000005 | 166 | 621 | 206 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 2eid_A | 0.000000007 | 166 | 621 | 206 | 637 | A Chain A, Galactose Oxidase W290g Mutant |
| PDB | 2wq8_A | 0.000000008 | 166 | 621 | 228 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
| PDB | 2vz3_A | 0.000000008 | 166 | 621 | 206 | 637 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
