| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g06560.1 |
| Family | GT5 |
| Protein Properties | Length: 642 Molecular Weight: 70952 Isoelectric Point: 6.2445 |
| Chromosome | Chromosome/Scaffold: 6 Start: 3079059 End: 3086808 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 135 | 631 | 0 |
| VVFVTGEASPYAKSGGLGDVCGSLPIALALRGHRVMVVMPRYMNGALNKNFANAFYTEKHIKIPCFGGEHEVTFFHEYRDSVDWVFVDHPSYHRPGNLYG DNFGAFGDNQFRYTLLCYAACEAPLILELGGYIYGQKCMFVVNDWHASLVPVLLAAKYRPYGVYRDARSVLVIHNLAHQGVEPASTYPDLGLPPEWYGAL EWVFPEWARRHALDKGEAVNFLKGAVVTADRIVTVSQGYSWEVTTAEGGQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDDLSGKAKCKA ELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEP CGLNQLYAMQYGTVPVVHGTGGLRDTVENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQIFE | |||
| Full Sequence |
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| Protein Sequence Length: 642 Download |
| MATAAGMGIG AACLVAPQVR PGRRLRLQRV RRRCVAELSR DGGSAQRPLA PAPLVKQPVL 60 PTFLVPTSTP PAPTQSPAPA PTPPPLPDSG VGEIEPDLEG LTEDSIDKTI FVASEQESEI 120 MDVKEQAQAK VTRSVVFVTG EASPYAKSGG LGDVCGSLPI ALALRGHRVM VVMPRYMNGA 180 LNKNFANAFY TEKHIKIPCF GGEHEVTFFH EYRDSVDWVF VDHPSYHRPG NLYGDNFGAF 240 GDNQFRYTLL CYAACEAPLI LELGGYIYGQ KCMFVVNDWH ASLVPVLLAA KYRPYGVYRD 300 ARSVLVIHNL AHQGVEPAST YPDLGLPPEW YGALEWVFPE WARRHALDKG EAVNFLKGAV 360 VTADRIVTVS QGYSWEVTTA EGGQGLNELL SSRKSVLNGI VNGIDINDWN PSTDKFLPYH 420 YSVDDLSGKA KCKAELQKEL GLPIRPDVPL IGFIGRLDYQ KGIDLIKLAI PDLMRDNIQF 480 VMLGSGDPGF EGWMRSTESG YRDKFRGWVG FSVPVSHRIT AGCDILLMPS RFEPCGLNQL 540 YAMQYGTVPV VHGTGGLRDT VENFNPFAEK GEQGTGWAFS PLTIEKMLWA LRMAISTYRE 600 HKSSWEGLMK RGMSSDFTWD HAASQYEQIF EWAFMDQPYV M* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 3.0e-103 | 134 | 630 | 507 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 1.0e-147 | 135 | 633 | 503 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 1.0e-179 | 135 | 631 | 504 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 135 | 632 | 498 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 135 | 631 | 498 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0009536 | plastid |
| GO:0009987 | cellular process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | A2Y9M4 | 0 | 1 | 641 | 1 | 641 | SSY1_ORYSI RecName: Full=Soluble starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Starch synthase I; AltName: Full=SSS 1; Flags: Precursor |
| GenBank | AAD49850.1 | 0 | 1 | 586 | 1 | 586 | AF165890_1 soluble starch synthase [Oryza sativa Japonica Group] |
| GenBank | ACY56162.1 | 0 | 1 | 641 | 1 | 641 | soluble starch synthase I [Oryza sativa Indica Group] |
| GenBank | EAZ35910.1 | 0 | 1 | 641 | 1 | 641 | hypothetical protein OsJ_20213 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056881.1 | 0 | 1 | 641 | 1 | 641 | Os06g0160700 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 134 | 630 | 11 | 508 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3vue_A | 0 | 134 | 630 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 135 | 630 | 3 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 134 | 630 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 134 | 630 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO595058 | 491 | 150 | 639 | 0 |
| GO872237 | 346 | 293 | 638 | 0 |
| GO885224 | 352 | 103 | 454 | 0 |
| GO885136 | 336 | 103 | 438 | 0 |
| GO842198 | 335 | 157 | 491 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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