| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g07130.1 |
| Family | CBM57 |
| Protein Properties | Length: 681 Molecular Weight: 73867.5 Isoelectric Point: 6.9721 |
| Chromosome | Chromosome/Scaffold: 6 Start: 3408660 End: 3418591 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 442 | 607 | 2.8e-29 |
| FAVNCGGKQYTPPSDPSNMFNDDSANLGAADFHVDTNNNWVVSHVGTDPFSNSSGIVTTGNGTNIPELYRTARTSTGSLWYYVVGLPSGKYTVQLFFAEI VIESGSGRRLFNIDIQDRNIMTDFDISKEAGGSNRPINRNYTADVTTSVLKIHLYWNGRGTCCIPR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 681 Download |
| MLTSWEAILE KMSTAPRLPP PRGAPALSVS DDQAPRPRLA EPTRGQPPKP LKSPLSTSSS 60 PSPSQSPPDA APPMASPAAP LALLILLVSL AIAAAQSGQP SSPPRNSTNI SDAAALHTVF 120 EKWGLEDGTM PQGYHPCGKL VWSNSSEMEA SINCSCSSNE CRITHLNVTG YRNITFIPAE 180 LFSLTELVSL DLSNNNLIGQ IPPQVSNLSK LETWHFNNNR LNESFPNASA LLSIQSLWMF 240 DNDIEGMVPG FIANFANLTD LRMYGMKLQG PIPENFSKLI NIENLMIGDL DTEGYPFNFT 300 GDWVNLSTLS LRNCGFTGKF PNQILKNLNK LTYVDLRSNN LSGSIDLQQY DSSLKYLYVG 360 ENNFNGSLPD QMPQSLVALD VTYNPLLRGR LPSSSADRKM RINYIGTSIG AGSSVGSENL 420 RLLNCVDMKG CNTTGLTNPV SFAVNCGGKQ YTPPSDPSNM FNDDSANLGA ADFHVDTNNN 480 WVVSHVGTDP FSNSSGIVTT GNGTNIPELY RTARTSTGSL WYYVVGLPSG KYTVQLFFAE 540 IVIESGSGRR LFNIDIQDRN IMTDFDISKE AGGSNRPINR NYTADVTTSV LKIHLYWNGR 600 GTCCIPRNGT YGPLVSAIRV FPSAETQASP PPVALTSRHD EKRRGVVAGI AALSIAATVI 660 SSSAVYLWWK WVSLVKHRKA * 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 1.0e-15 | 177 | 435 | 290 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 1.0e-17 | 142 | 392 | 262 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-18 | 170 | 397 | 234 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-22 | 177 | 394 | 227 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 4.0e-44 | 440 | 618 | 182 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000166 | nucleotide binding |
| GO:0005515 | protein binding |
| GO:0005575 | cellular_component |
| GO:0005886 | plasma membrane |
| GO:0006464 | cellular protein modification process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC80088.1 | 0 | 99 | 680 | 26 | 607 | hypothetical protein OsI_21825 [Oryza sativa Indica Group] |
| GenBank | EEE65161.1 | 0 | 99 | 440 | 26 | 342 | hypothetical protein OsJ_20262 [Oryza sativa Japonica Group] |
| GenBank | EEE65161.1 | 0 | 538 | 680 | 338 | 480 | hypothetical protein OsJ_20262 [Oryza sativa Japonica Group] |
| RefSeq | NP_001056921.1 | 0 | 1 | 680 | 1 | 680 | Os06g0167500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002436559.1 | 0 | 98 | 677 | 26 | 561 | hypothetical protein SORBIDRAFT_10g004730 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.0000000001 | 177 | 372 | 359 | 558 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 3rgz_A | 0.0000003 | 163 | 394 | 225 | 437 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 3rgz_A | 0.001 | 187 | 393 | 296 | 484 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 3rgz_A | 0.002 | 190 | 384 | 105 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 3rgz_A | 0.003 | 125 | 274 | 578 | 722 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
