| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g13050.1 |
| Family | AA2 |
| Protein Properties | Length: 844 Molecular Weight: 90009.1 Isoelectric Point: 6.2965 |
| Chromosome | Chromosome/Scaffold: 6 Start: 7148961 End: 7158822 |
| Description | RNI-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA2 | 45 | 305 | 0 |
| KQISNPTTAAGVLRLFFHDCFVGGCDASVLVASTAAARSERDADVNLSLPGDAFDALARAKAALEVECPGVVSCADLLAVAARDLVTMTGGPYYPLRLGR KDGLSSSPSAPDAEIPHANLTVSRLVAVFAAKGFTVQDLVALSGAHTLGFSHCKEFAARIYGGGGGGADPTMNPALAKRLQEACRDYRRGPTIAAFNDVM TPGRFDNMYFVNLRRGLGLLATDQELYGDARTRPHVERYAANETAFFADFARAARRLSHHG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 844 Download |
| MDTHLVVVLA LLAAAAAAEA KMSADYYSKT CPRADRIIAD VLAQKQISNP TTAAGVLRLF 60 FHDCFVGGCD ASVLVASTAA ARSERDADVN LSLPGDAFDA LARAKAALEV ECPGVVSCAD 120 LLAVAARDLV TMTGGPYYPL RLGRKDGLSS SPSAPDAEIP HANLTVSRLV AVFAAKGFTV 180 QDLVALSGAH TLGFSHCKEF AARIYGGGGG GADPTMNPAL AKRLQEACRD YRRGPTIAAF 240 NDVMTPGRFD NMYFVNLRRG LGLLATDQEL YGDARTRPHV ERYAANETAF FADFARAARR 300 LSHHGVKNGA NGEIGGGVNL PDLWVMWLGL AARGTTRWSG DDVVQRTVIW RVVQNLLPGK 360 TKDQSSGEST PSGIMWSFAA GSNLSTSASF NAEKESRKNL NKFYKEIRTL KNVNMAGRQF 420 GDEGLFFLAE SLAYNKSAEE VDFSGNGITA VGIEAFDGIL QINTALKSLN LSGNAIGDEG 480 AKCLSDILVE NVGIQKLLLN STNIGDEGAK AISDMLKKNK TIRTLQLSNN TIEYSGFASI 540 AEALLENNVL RSLFVNGNYG GPLGASSLAK GILGNKTLRE LHLHGNGFGN EGVRALMSAL 600 SAHKGKITVL DIGNNNITSE GSLHVAEFIK RTKSLLWLSL YMNDISDEGA EKVADALKQN 660 KTISTVDLGG NNIHSKGVSA IAETLKDNSV VTTLELSYNP IGPEGVKALC DVLKFNGKIQ 720 TLKLGWCQIG VSGAEFVADC LKYNTTLSTL DLRANGLGDD GAICLARSFK IINESLTSLD 780 LGFNEIRDDG AFALAQALKA NEDLAVTSLN LANNFFTKFG QVALSEARDH VYEMSEKEID 840 IFF* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 1.0e-6 | 255 | 286 | 32 | + Peroxidase. | ||
| cd00116 | LRR_RI | 7.0e-36 | 467 | 782 | 319 | + Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). | ||
| pfam00141 | peroxidase | 6.0e-41 | 38 | 191 | 154 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 5.0e-49 | 26 | 314 | 295 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 6.0e-113 | 23 | 314 | 293 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000003 | reproduction |
| GO:0004601 | peroxidase activity |
| GO:0005739 | mitochondrion |
| GO:0006979 | response to oxidative stress |
| GO:0009536 | plastid |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD37894.1 | 0 | 351 | 823 | 122 | 609 | deliriumA-like [Oryza sativa Japonica Group] |
| GenBank | EEC80297.1 | 0 | 341 | 843 | 134 | 618 | hypothetical protein OsI_22316 [Oryza sativa Indica Group] |
| GenBank | EEE65409.1 | 0 | 346 | 830 | 106 | 590 | hypothetical protein OsJ_20746 [Oryza sativa Japonica Group] |
| RefSeq | NP_001057249.1 | 0 | 375 | 818 | 1 | 444 | Os06g0237400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002438133.1 | 0 | 348 | 843 | 120 | 614 | hypothetical protein SORBIDRAFT_10g008560 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 21 | 314 | 2 | 296 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1pa2_A | 0 | 21 | 314 | 2 | 296 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1sch_B | 0 | 21 | 314 | 1 | 286 | A Chain A, Peanut Peroxidase |
| PDB | 1sch_A | 0 | 21 | 314 | 1 | 286 | A Chain A, Peanut Peroxidase |
| PDB | 3hdl_A | 0 | 26 | 314 | 6 | 295 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
