CAZyme Information

Basic Information
SpeciesOryza sativa
Cazyme IDLOC_Os06g13650.2
FamilyGH38
Protein PropertiesLength: 1185 Molecular Weight: 134363 Isoelectric Point: 7.2298
ChromosomeChromosome/Scaffold: 6 Start: 7563737 End: 7571102
Descriptiongolgi alpha-mannosidase II
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH381675060
  KVFVAPHSHNDPGWRLTVEEYYEKQSRHILDTIIESLSKDSRRKFLWEEMSYLERWWRDAPRKKQEAFTKLVRDGQLEIVSGGWVMNDEANSHYFAIIEQ
  MMEGNMWLNDTIGVVPKNSWSIDPFGYSATMAYLLRRMGFHNMLIQRTHYELKKELAMNKNLEYLWRQNWDIDETTDIFVHMMPFYSYDIPHTCGPEPAI
  CCQFDFARMRSFSYESCPWRFDPVETNANNVQERAMKLLDQYRKKSTLYRTNTLLIPLGDDFRYVSTEEAEAQFRNYEKLFDYINSNPHLKAEVKFGTLE
  DYFSTLRDEAERINYTRPGELVSSELPGFPTLSGDFFTYA
Full Sequence
Protein Sequence     Length: 1185     Download
MPFFSGGGGG RSGALLPTTS KPKGHHHLRS KGLSSPAASR RRGAHSASSS ASSSSRRRVL    60
YVAAAAFAAL FLLAFFRLGL PSSRPAATSP ARLRPRLTRR PAFRRDSAAA EAAAAAVAAR    120
IGREAHVDIT TKDLYDRIQF LDVDGGAWKQ GWEVSYKSDE WDGEKLKVFV APHSHNDPGW    180
RLTVEEYYEK QSRHILDTII ESLSKDSRRK FLWEEMSYLE RWWRDAPRKK QEAFTKLVRD    240
GQLEIVSGGW VMNDEANSHY FAIIEQMMEG NMWLNDTIGV VPKNSWSIDP FGYSATMAYL    300
LRRMGFHNML IQRTHYELKK ELAMNKNLEY LWRQNWDIDE TTDIFVHMMP FYSYDIPHTC    360
GPEPAICCQF DFARMRSFSY ESCPWRFDPV ETNANNVQER AMKLLDQYRK KSTLYRTNTL    420
LIPLGDDFRY VSTEEAEAQF RNYEKLFDYI NSNPHLKAEV KFGTLEDYFS TLRDEAERIN    480
YTRPGELVSS ELPGFPTLSG DFFTYADRNQ DYWSGYYVSR PYFKAVDRVL EQTLRASEIL    540
SSFVLGYCQK LQCVKLPISF SHKLTAARRN LALFQHHDGV TGTAKDHVVV DYGTRMHTSL    600
QDLQLFMSRA VEVLLGDIHD RSDPTLLSHF EPVQERSKYD VQPVYKVLNP HGGKAHSVVL    660
FNPLEQTRDE IVMVVVSNPD VSVLNSNGSC LRSQISPEWQ YVSGEKVSTG QHRLYWRASV    720
PALGLETYYV ATGYDDCAKA TPAVVKAFTT AGQFPCPEPY VCSKLEGKTV EMKNSYHSLS    780
FDVRHGLLQT VTRNKDGEHT DVGEEIGMYR SHGSGAYLFK PIGEAQSIVE EGGYFILSEG    840
PLVQEAHSLP KTQWHKSPIS HSTRIYSCGD SIQDMLIEKE YHVELVGHVF NDKELIVRFK    900
TDIDNQGVFY SDLNGFQMSR RQTYDKIPLQ GNYYPMPSLA FLQDSLGNRF SVHSKQSLGA    960
ASLKNGWLEI MLDRRLTQDD GRGLGQGVVD NRPMNVIFHL LRESNVSALP KTHSLLTLQP    1020
SLLSHRVGAH LNYPMHAFVS KKAQEKSFKL AQQTFAPLTS PLPCDVHVVN LKAPQPLKFH    1080
HAEAVEARFA LLLQRRGWDA SFCRRGGLNC TTIGEEPVNL FYMFKDLAVL DVKATSLNLL    1140
HDDPEMLGYL EQIGDVAQEG NVLISPMDIQ AYKLDLQPPS SQEE* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00451GH38N_AMII_euk3.0e-108166452288+
cd11667GH38N_Man2A22.0e-151166517352+
cd11666GH38N_Man2A18.0e-160166517352+
PLN02701PLN02701012711771052+
cd10809GH38N_AMII_GMII_SfManIII_like0165517353+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559alpha-mannosidase activity
GO:0005794Golgi apparatus
GO:0005975carbohydrate metabolic process
GO:0006013mannose metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAF19191.20153118411032Os06g0245700 [Oryza sativa Japonica Group]
GenBankEEC80313.1030118471150hypothetical protein OsI_22355 [Oryza sativa Indica Group]
GenBankEEE65435.101371184471083hypothetical protein OsJ_20797 [Oryza sativa Japonica Group]
RefSeqNP_001057277.101118411173Os06g0245700 [Oryza sativa (japonica cultivar-group)]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1hxk_A0126103910903A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hww_A0126103910903A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hty_A0126103910903A Chain A, Golgi Alpha-Mannosidase Ii
PDB1ps3_A09310392933A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine
PDB3eju_A0126103940933A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine
Transmembrane Domains
StartEnd
5981
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CB6620862812975770
CB67420027376710390
FL7143862732535250
CB6468112523566070
GR3180372671273930
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_002_00345.1.265.483Aquca_002_00345.1.265.483Aquca_006_00230.1Aquca_006_00257.5Aquca_006_00257.9
Aquca_006_00257.8Aquca_006_00257.7Aquca_006_00257.6Aquca_006_00257.4Aquca_006_00257.3
Aquca_006_00257.2Aquca_006_00257.1Aquca_043_00016.7Aquca_043_00016.8Aquca_043_00016.6
Aquca_043_00016.5Aquca_043_00016.4Aquca_043_00016.3Aquca_043_00016.2Aquca_043_00016.1
Aquca_043_00019.2Aquca_043_00019.1Aquca_043_00018.1Aquca_056_00071.1Aquca_002_00345.1.162.261
Aquca_002_00345.1.162.261
Arabidopsis lyrata488339488225497001484445
Arabidopsis thalianaAT5G14950.1AT5G66150.1AT5G13980.3AT5G13980.2AT5G13980.1
AT3G26720.2AT3G26720.1
Brachypodium distachyonBradi1g44550.1Bradi3g21117.1Bradi4g17327.1Bradi4g17317.1
Brassica rapaBra023496Bra006275Bra037183Bra006227Bra025225
Carica papayaevm.model.supercontig_6.275evm.model.supercontig_70.70evm.model.supercontig_2646.1evm.TU.contig_36966.1evm.model.supercontig_70.69
Capsella rubellaCarubv10000075mCarubv10002909mCarubv10027738mCarubv10016625m
Citrus clementinaCiclev10014083mCiclev10017635mCiclev10024829mCiclev10024800mCiclev10030627m
Ciclev10014156mCiclev10014160mCiclev10014123m
Citrus sinensisorange1.1g002547morange1.1g002518morange1.1g002134morange1.1g001061morange1.1g015028m
orange1.1g002366morange1.1g004057morange1.1g001910morange1.1g001850morange1.1g002764m
orange1.1g002170morange1.1g002162morange1.1g002383morange1.1g001963morange1.1g001813m
orange1.1g002938morange1.1g002542morange1.1g002064morange1.1g002056morange1.1g002046m
orange1.1g002036m
Cucumis sativusCucsa.339310.1Cucsa.043720.1Cucsa.188400.2Cucsa.188400.1
Eucalyptus grandisEucgr.J02166.1Eucgr.L01536.1Eucgr.J02456.1Eucgr.K02195.1Eucgr.J02455.3
Eucgr.J02455.2Eucgr.J02455.1Eucgr.I01600.1Eucgr.G01931.1Eucgr.J02460.1
Eucgr.J02454.1Eucgr.L01537.1Eucgr.J02457.1Eucgr.J02459.2Eucgr.J02459.1
Fragaria vescamrna28330.1-v1.0-hybridmrna14585.1-v1.0-hybridmrna01394.1-v1.0-hybrid.37.348mrna01394.1-v1.0-hybrid.37.348mrna06416.1-v1.0-hybrid.39.351
mrna06416.1-v1.0-hybrid.39.351mrna14589.1-v1.0-hybrid.71.344
Glycine maxGlyma13g04761.3Glyma13g04761.2Glyma19g01890.1Glyma13g04761.1Glyma02g05240.2
Glyma02g05240.1Glyma16g23600.1Glyma01g36980.1Glyma06g17270.1Glyma04g37790.1
Glyma19g27660.2Glyma19g27660.1Glyma16g05240.2Glyma16g05240.1
Gossypium raimondiiGorai.001G258600.2Gorai.001G258600.1Gorai.006G027500.1Gorai.003G008600.2Gorai.003G008600.1
Gorai.006G000300.3Gorai.006G000300.2Gorai.006G000300.1Gorai.012G082700.6Gorai.012G082700.9
Gorai.012G082700.8Gorai.012G082700.7Gorai.012G082700.5Gorai.012G082700.4Gorai.012G082700.3
Gorai.012G082700.2Gorai.012G082700.10Gorai.012G082700.1Gorai.003G116600.2Gorai.003G116600.1
Linum usitatissimumLus10014507Lus10015337.248.571Lus10015337.248.571Lus10032179Lus10039457
Lus10012578Lus10035111Lus10012577Lus10036074Lus10025960
Lus10014259Lus10041516Lus10015337.158.248Lus10015337.158.248
Malus domesticaMDP0000888429MDP0000267909MDP0000250936MDP0000139458MDP0000274501
MDP0000274500MDP0000409920MDP0000163211MDP0000657082MDP0000211018
Manihot esculentacassava4.1_000571mcassava4.1_001602mcassava4.1_000993mcassava4.1_000971mcassava4.1_000869m
cassava4.1_001123mcassava4.1_001106m
Medicago truncatulaMedtr4g071680.1Medtr6g008850.1Medtr8g075330.1Medtr7g084040.1Medtr3g098650.2
Medtr3g098650.1Medtr7g084030.1
Mimulus guttatusmgv1a000435mmgv1a000658mmgv1a000852mmgv1a000690m
Oryza sativaLOC_Os06g13650.1LOC_Os06g13650.3LOC_Os11g32260.2LOC_Os11g32260.1LOC_Os10g05069.2
LOC_Os10g05069.1LOC_Os10g05069.3
Panicum virgatumPavirv00027286mPavirv00014532mPavirv00024149mPavirv00025946mPavirv00065120m
Physcomitrella patensPp1s10_34V6.1Pp1s77_136V6.1Pp1s129_147V6.1
Phaseolus vulgarisPhvul.004G022500.1Phvul.003G264400.1Phvul.001G084400.1Phvul.002G107300.1Phvul.001G084700.1
Phvul.009G161600.1
Picea abiesMA_10434251g0010MA_879613g0010MA_4107059g0010
Populus trichocarpaPotri.017G073900.2Potri.017G073900.1Potri.001G350400.2Potri.001G350400.1Potri.014G143600.1
Potri.014G143600.2Potri.007G056300.1Potri.002G238200.2Potri.002G238200.1Potri.012G106500.2
Potri.012G106500.1
Prunus persicappa000458mppa021513mppa000707mppa000755mppa000717m
Ricinus communis29822.m00342029868.m00034130131.m00698230131.m00698130147.m014412
Setaria italicaSi005719mSi038673mSi025964mSi034056mSi025881m
Selaginella moellendorffii104910154366266756410022178241
Sorghum bicolorSb10g008770.1Sb01g026405.1Sb05g019600.1Sb01g026390.1
Thellungiella halophilaThhalv10012487mThhalv10012612mThhalv10012546mThhalv10003575mThhalv10003577m
Vitis viniferaGSVIVT01032586001GSVIVT01018752001GSVIVT01032988001GSVIVT01008340001GSVIVT01008642001
GSVIVT01032989001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)