| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g20620.1 |
| Family | GH5 |
| Protein Properties | Length: 441 Molecular Weight: 49455.1 Isoelectric Point: 8.1088 |
| Chromosome | Chromosome/Scaffold: 6 Start: 11877529 End: 11881768 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 66 | 390 | 2.4e-32 |
| TGSPLYVNGWNSYWLLPARSPALAAEMLRRGRRMGLSVCRTWAFSDGGPGALQISPGRFSEAVFQVLDYVIYEARRNHIRLILCLVNNLDNLGGKAQYVQ WAQAAGANMTNSTDSFYSHPTIKRYYKDYVKAILTRRNSYSRIRYSDEPAIFAWELMNEPRCVSNSSGPYLQAWIAEMAAYVKSLDTNHLVTVGTEGFYG PGIAERLGVNPGEWAASLCSDFIQNSAVEHIDFASVHAYPDSWLPRASLEEKVRYLSNWVDSHLNDSEQILKKPVLFTEVGYLQHSDANSNSTVDRDIIL RIVYDKIYDSARKLQAGSGALIWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 441 Download |
| MRQERRLYSL LGLLLLLAVV YLTWFPTTHD GGGGGGGGWV KLPVPWLQPR MPFAARRGTH 60 FVDADTGSPL YVNGWNSYWL LPARSPALAA EMLRRGRRMG LSVCRTWAFS DGGPGALQIS 120 PGRFSEAVFQ VLDYVIYEAR RNHIRLILCL VNNLDNLGGK AQYVQWAQAA GANMTNSTDS 180 FYSHPTIKRY YKDYVKAILT RRNSYSRIRY SDEPAIFAWE LMNEPRCVSN SSGPYLQAWI 240 AEMAAYVKSL DTNHLVTVGT EGFYGPGIAE RLGVNPGEWA ASLCSDFIQN SAVEHIDFAS 300 VHAYPDSWLP RASLEEKVRY LSNWVDSHLN DSEQILKKPV LFTEVGYLQH SDANSNSTVD 360 RDIILRIVYD KIYDSARKLQ AGSGALIWQL MVEGTHMYGD NFSVVARDRP STYSLITNQS 420 CRLQRLYGEG DPGWQCSIPP * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 5.0e-6 | 142 | 307 | 190 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 1.0e-27 | 86 | 413 | 332 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ36778.1 | 0 | 1 | 399 | 1 | 399 | hypothetical protein OsJ_21115 [Oryza sativa Japonica Group] |
| GenBank | EEC80480.1 | 0 | 1 | 382 | 1 | 382 | hypothetical protein OsI_22707 [Oryza sativa Indica Group] |
| RefSeq | NP_001057484.1 | 0 | 1 | 365 | 1 | 368 | Os06g0311600 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q0DCM5 | 0 | 1 | 440 | 1 | 440 | MAN6_ORYSJ RecName: Full=Mannan endo-1,4-beta-mannosidase 6; AltName: Full=Beta-mannanase 6; AltName: Full=Endo-beta-1,4-mannanase 6; AltName: Full=OsMAN6; Flags: Precursor |
| RefSeq | XP_002436944.1 | 0 | 1 | 440 | 1 | 438 | hypothetical protein SORBIDRAFT_10g011830 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 53 | 426 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 57 | 412 | 17 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 57 | 412 | 17 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 57 | 412 | 17 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 57 | 412 | 17 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
