| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g23420.1 |
| Family | GT47 |
| Protein Properties | Length: 558 Molecular Weight: 61925.2 Isoelectric Point: 9.4783 |
| Chromosome | Chromosome/Scaffold: 6 Start: 13674054 End: 13676418 |
| Description | glycosyltransferase 18 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 81 | 417 | 0 |
| CKAGLIYVYDLPPEFNHDLVAHCDRLWPWYSFCPYLSNGGLGRPAAEVPALSAVVPNASLPNWYNTDQFPLEVIVHRRLLSHRCRTIDASLATAFYVPFY AGLDVGSHLWGPNSTVADRDRAGARLLRWLRGQPFFAKSGGWDHFITLGRITWDFRRYGADGWGTNLVLMPGMENVTRLVIEGDRLDPLDVGVPYPTGFH PRRAADVRAWQEHVLSLDRRNLFGFAGAPRSGFPDDFRDVLLEECEDAGSDRCRAVDCRGTRCNDDGAAVMRLFMGSRFCLQPRGDSFTRRSLFDCMVAG AVPVLFWRRTAYDAYRWFLPRGEEGEWSVFIDRRALR | |||
| Full Sequence |
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| Protein Sequence Length: 558 Download |
| MPESPTSPPT SPLPGSPTNN ATPPSPVSAF LRATVLFAAF LALQLVLFKS LLTFPSSRFL 60 PAPRRSNSTW ANGAVDDAEE CKAGLIYVYD LPPEFNHDLV AHCDRLWPWY SFCPYLSNGG 120 LGRPAAEVPA LSAVVPNASL PNWYNTDQFP LEVIVHRRLL SHRCRTIDAS LATAFYVPFY 180 AGLDVGSHLW GPNSTVADRD RAGARLLRWL RGQPFFAKSG GWDHFITLGR ITWDFRRYGA 240 DGWGTNLVLM PGMENVTRLV IEGDRLDPLD VGVPYPTGFH PRRAADVRAW QEHVLSLDRR 300 NLFGFAGAPR SGFPDDFRDV LLEECEDAGS DRCRAVDCRG TRCNDDGAAV MRLFMGSRFC 360 LQPRGDSFTR RSLFDCMVAG AVPVLFWRRT AYDAYRWFLP RGEEGEWSVF IDRRALRVGN 420 VSVRDVLEGY SERRVRRMRE RVVEMIPRLV YGSSPDGLGD GMDDALDVAL GGVLKRFRHR 480 RWSIGHEAER PPGRLVAGAP PRRGSSKTTT PPTSNGRNGS VIGQRASRHR STAASSAYIK 540 TVLSEAPASR SKSLQQS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 3.0e-44 | 81 | 414 | 346 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008152 | metabolic process |
| GO:0009536 | plastid |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAZ00823.1 | 0 | 1 | 487 | 1 | 487 | hypothetical protein OsI_22853 [Oryza sativa Indica Group] |
| GenBank | EAZ36900.1 | 0 | 1 | 487 | 1 | 487 | hypothetical protein OsJ_21244 [Oryza sativa Japonica Group] |
| RefSeq | NP_001053616.1 | 0 | 81 | 483 | 67 | 470 | Os04g0574100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001057569.1 | 0 | 15 | 557 | 15 | 556 | Os06g0342000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448367.1 | 0 | 1 | 557 | 1 | 568 | hypothetical protein SORBIDRAFT_06g026010 [Sorghum bicolor] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE161828 | 264 | 128 | 391 | 0 |
| EE180597 | 243 | 149 | 391 | 0 |
| EE161829 | 240 | 152 | 391 | 0 |
| EE180596 | 233 | 128 | 360 | 0 |
| DY290373 | 340 | 115 | 454 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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