y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os06g34660.1 |
Family | CBM43 |
Protein Properties | Length: 187 Molecular Weight: 18422.7 Isoelectric Point: 4.3532 |
Chromosome | Chromosome/Scaffold: 6 Start: 20145118 End: 20148099 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 41 | 127 | 1.1e-31 |
WCVAKNNADDAALQAAVDWACGPAGGADCRAIQQGGACYDPPDLLAHASYAFNDYFLRAGGAPAAPAACDFSGAAALTALNPSHGSC |
Full Sequence |
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Protein Sequence Length: 187 Download |
MPAASSPLPL PLLLLLLLAV AGAGAAGAGA GVGVSGGGQL WCVAKNNADD AALQAAVDWA 60 CGPAGGADCR AIQQGGACYD PPDLLAHASY AFNDYFLRAG GAPAAPAACD FSGAAALTAL 120 NPSHGSCVFP SSTSPKNGSF TGTTTYGPAG ADLSKSSSRQ LNFWSLLLCI CLSVTFFDAF 180 PSDTFS* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-13 | 40 | 96 | 62 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-25 | 40 | 129 | 90 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0005575 | cellular_component |
GO:0005886 | plasma membrane |
GO:0008150 | biological_process |
GO:0016020 | membrane |
GO:0030246 | carbohydrate binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE65832.1 | 3e-38 | 35 | 134 | 35 | 121 | hypothetical protein OsJ_21587 [Oryza sativa Japonica Group] |
RefSeq | NP_001057795.1 | 0 | 35 | 186 | 35 | 186 | Os06g0537700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132372.1 | 0 | 13 | 176 | 6 | 170 | hypothetical protein LOC100193817 [Zea mays] |
RefSeq | XP_002438507.1 | 0 | 24 | 176 | 16 | 167 | hypothetical protein SORBIDRAFT_10g021130 [Sorghum bicolor] |
RefSeq | XP_002525141.1 | 2e-40 | 29 | 154 | 21 | 147 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-17 | 41 | 134 | 13 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |