| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g35590.1 |
| Family | AA7 |
| Protein Properties | Length: 532 Molecular Weight: 58422.4 Isoelectric Point: 9.6189 |
| Chromosome | Chromosome/Scaffold: 6 Start: 20767515 End: 20769685 |
| Description | FAD-binding Berberine family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA7 | 81 | 526 | 0 |
| TCNPLYIVTPTDVKHIQVAVSCGRRHNVRIRVRSGGHDYEGLSYRSEIPEPFAIVDLVNMRNVTVDGKARTAWVESGAQIGELYYGISKASPTLAFPAGV CPTIGVGGHFSGGGFGMLLRKFGLASDNVLDVKVVDANGKVQDRKSMGEDYLWAVRGGGGSSFGIVVSWKLRLLPVPATVTVIQMPKMVNEGAVDLLTKW QSLAPTFPEDLMIRVMAQAQKAVFEGLYLGTCDALLPLVTSRFPELGVNRSHCNEMSWVQSIAFIHLGKNATVKDILNRTSSIRAFGKYKSDYVTQPLSK ATWDTIYKDWFSKPGSGIMIMDPYGATISKPGEADTPFPHRKGMLYNIQYITFWFGEGAPAEAPIKWIRDFYAFMEPYVTKNPRQAYVNYRDLDLGVNAV EAGANVSCYQVGKVWGEKYFKGNFERLARTKAKVDPTDFFRNEQSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 532 Download |
| MARTSMTTTS RALALVLLSS CCLLVAVDAA YAKKPNLSKN DFLSCLAAGI PARQLYAKGS 60 PSYGSVLTST IRNLRYLSSK TCNPLYIVTP TDVKHIQVAV SCGRRHNVRI RVRSGGHDYE 120 GLSYRSEIPE PFAIVDLVNM RNVTVDGKAR TAWVESGAQI GELYYGISKA SPTLAFPAGV 180 CPTIGVGGHF SGGGFGMLLR KFGLASDNVL DVKVVDANGK VQDRKSMGED YLWAVRGGGG 240 SSFGIVVSWK LRLLPVPATV TVIQMPKMVN EGAVDLLTKW QSLAPTFPED LMIRVMAQAQ 300 KAVFEGLYLG TCDALLPLVT SRFPELGVNR SHCNEMSWVQ SIAFIHLGKN ATVKDILNRT 360 SSIRAFGKYK SDYVTQPLSK ATWDTIYKDW FSKPGSGIMI MDPYGATISK PGEADTPFPH 420 RKGMLYNIQY ITFWFGEGAP AEAPIKWIRD FYAFMEPYVT KNPRQAYVNY RDLDLGVNAV 480 EAGANVSCYQ VGKVWGEKYF KGNFERLART KAKVDPTDFF RNEQSIPPLL A* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0277 | GlcD | 3.0e-13 | 84 | 529 | 472 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| pfam08031 | BBE | 2.0e-18 | 466 | 527 | 62 | + Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine. | ||
| pfam01565 | FAD_binding_4 | 2.0e-22 | 84 | 223 | 141 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003674 | molecular_function |
| GO:0003824 | catalytic activity |
| GO:0005488 | binding |
| GO:0005623 | cell |
| GO:0008152 | metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS02108.1 | 0 | 10 | 530 | 4 | 522 | FAD-linked oxidoreductase BG60 [Cynodon dactylon] |
| GenBank | ABB78007.1 | 0 | 9 | 530 | 3 | 522 | major pollen allergen Phl p 4 precursor [Phleum pratense] |
| EMBL | CAH92630.1 | 0 | 9 | 530 | 1 | 518 | pollen allergen Sec c 4 [Secale cereale] |
| GenBank | EEC80784.1 | 0 | 1 | 531 | 1 | 531 | hypothetical protein OsI_23312 [Oryza sativa Indica Group] |
| RefSeq | NP_001057829.1 | 0 | 1 | 531 | 1 | 531 | Os06g0548800 [Oryza sativa (japonica cultivar-group)] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3tsj_B | 0 | 35 | 530 | 4 | 497 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3tsj_A | 0 | 35 | 530 | 4 | 497 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3tsh_A | 0 | 35 | 530 | 4 | 497 | A Chain A, Crystal Structure Of Phl P 4, A Grass Pollen Allergen With Glucose Dehydrogenase Activity |
| PDB | 4dns_B | 0 | 31 | 530 | 5 | 497 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4dns_A | 0 | 31 | 530 | 5 | 497 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cannabinoid biosynthesis | RXN-7854 | EC-1.21.3 | tetrahydrocannabinolic acid synthase |
