| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g37560.1 |
| Family | GH35 |
| Protein Properties | Length: 716 Molecular Weight: 78280.2 Isoelectric Point: 7.722 |
| Chromosome | Chromosome/Scaffold: 6 Start: 22245386 End: 22251772 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 29 | 332 | 0 |
| LTINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPVQGQYYFSDRYDLVRFVKLVKQAGLYVNLRIGPYVCAEWNYGGFPVWLK YVPGISFRTDNGPFKAAMQTFVEKIVSMMKSEGLFEWQGGPIILAQVENEYGPMESVMGSGAKSYVDWAAKMAVATNAGVPWIMCKQDDAPDPVINTCNG FYCDDFTPNSKNKPSMWTEAWSGWFTAFGGTVPQRPVEDLAFAVARFIQKGGSFINYYMYHGGTNFDRTAGGPFIATSYDYDAPIDEYGLLRQPKWGHLT NLHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 716 Download |
| MSGGAVAFLL LVAAAAVANA AVTYDHRSLT INGQRRILIS GSIHYPRSTP EMWPDLIQKA 60 KDGGLDVIQT YVFWNGHEPV QGQYYFSDRY DLVRFVKLVK QAGLYVNLRI GPYVCAEWNY 120 GGFPVWLKYV PGISFRTDNG PFKAAMQTFV EKIVSMMKSE GLFEWQGGPI ILAQVENEYG 180 PMESVMGSGA KSYVDWAAKM AVATNAGVPW IMCKQDDAPD PVINTCNGFY CDDFTPNSKN 240 KPSMWTEAWS GWFTAFGGTV PQRPVEDLAF AVARFIQKGG SFINYYMYHG GTNFDRTAGG 300 PFIATSYDYD APIDEYGLLR QPKWGHLTNL HKAIKQAETA LVAGDPTVQN IGNYEKAYVF 360 RSSSGDCAAF LSNFHTSAAA RVAFNGRRYD LPAWSISVLP DCRTAVYNTA TVTAASSPAK 420 MNPAGGFTWQ SYGEATNSLD ETAFTKDGLV EQLSMTWDKS DYLWYTTYVN IDSGEQFLKS 480 GQWPQLTVYS AGHSVQVFVN GQYFGNAYGG YDGPKLTYSG YVKMWQGSNK ISILSSAVGL 540 PNVGTHYETW NIGVLGPVTL SGLNEGKRDL SKQKWTYQIG LKGEKLGVHS VSGSSSVEWG 600 GAAGKQPVTW HRAYFNAPAG GAPVALDLGS MGKGQAWVNG HLIGRYWSYK ASGNCGGCSY 660 AGTYSEKKCQ ANCGDASQRW YHVPRSWLNP SGNLVVLLEE FGGDLSGVTL MTRTT* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 0.0008 | 44 | 180 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam13364 | BetaGal_dom4_5 | 0.0008 | 454 | 519 | 68 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 5.0e-21 | 24 | 324 | 353 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-159 | 28 | 334 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 23 | 715 | 699 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005515 | protein binding |
| GO:0005575 | cellular_component |
| GO:0005618 | cell wall |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG30563.1 | 0 | 19 | 714 | 25 | 722 | beta-galactosidase precursor [Zea mays] |
| GenBank | EAZ01416.1 | 0 | 25 | 715 | 27 | 717 | hypothetical protein OsI_23450 [Oryza sativa Indica Group] |
| RefSeq | NP_001057920.1 | 0 | 25 | 715 | 25 | 715 | Os06g0573600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130532.1 | 0 | 19 | 714 | 25 | 721 | hypothetical protein LOC100191631 [Zea mays] |
| RefSeq | XP_002437187.1 | 0 | 20 | 715 | 29 | 725 | hypothetical protein SORBIDRAFT_10g022620 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1.96182e-44 | 28 | 330 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0003 | 486 | 702 | 400 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-39 | 22 | 337 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1e-39 | 22 | 337 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 1e-39 | 22 | 337 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
